Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HRH3Q9Y5N1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
HRH3Q9Y5N1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HRH3Q9Y5N1 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
HRH3Q9Y5N1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HRH3Q9Y5N1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.25■□□□□ 0.83
HRH3Q9Y5N1 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HRH3Q9Y5N1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HRH3Q9Y5N1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
HRH3Q9Y5N1 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
HRH3Q9Y5N1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.25■□□□□ 0.83
HRH3Q9Y5N1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HRH3Q9Y5N1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.25■□□□□ 0.83
HRH3Q9Y5N1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.25■□□□□ 0.83
HRH3Q9Y5N1 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HRH3Q9Y5N1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HRH3Q9Y5N1 AC133637.1-201ENST00000624115 1537 ntBASIC20.25■□□□□ 0.83
HRH3Q9Y5N1 DUSP8P3-201ENST00000399571 1760 ntBASIC20.25■□□□□ 0.83
HRH3Q9Y5N1 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
HRH3Q9Y5N1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HRH3Q9Y5N1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HRH3Q9Y5N1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HRH3Q9Y5N1 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HRH3Q9Y5N1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HRH3Q9Y5N1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.24■□□□□ 0.83
HRH3Q9Y5N1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HRH3Q9Y5N1 AC010525.1-201ENST00000585559 441 ntBASIC20.24■□□□□ 0.83
HRH3Q9Y5N1 AC087623.3-201ENST00000607047 1098 ntBASIC20.24■□□□□ 0.83
HRH3Q9Y5N1 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HRH3Q9Y5N1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HRH3Q9Y5N1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HRH3Q9Y5N1 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HRH3Q9Y5N1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
HRH3Q9Y5N1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HRH3Q9Y5N1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.23■□□□□ 0.83
HRH3Q9Y5N1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HRH3Q9Y5N1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.23■□□□□ 0.83
HRH3Q9Y5N1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HRH3Q9Y5N1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HRH3Q9Y5N1 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HRH3Q9Y5N1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
HRH3Q9Y5N1 AC097381.1-201ENST00000429019 1296 ntBASIC20.23■□□□□ 0.83
HRH3Q9Y5N1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HRH3Q9Y5N1 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.23■□□□□ 0.83
HRH3Q9Y5N1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.23■□□□□ 0.83
HRH3Q9Y5N1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.23■□□□□ 0.83
HRH3Q9Y5N1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HRH3Q9Y5N1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
HRH3Q9Y5N1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HRH3Q9Y5N1 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HRH3Q9Y5N1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.22■□□□□ 0.83
HRH3Q9Y5N1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HRH3Q9Y5N1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.22■□□□□ 0.83
HRH3Q9Y5N1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HRH3Q9Y5N1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.22■□□□□ 0.83
HRH3Q9Y5N1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.22■□□□□ 0.83
HRH3Q9Y5N1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
HRH3Q9Y5N1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.22■□□□□ 0.83
HRH3Q9Y5N1 C9orf163-202ENST00000624034 2573 ntBASIC20.22■□□□□ 0.83
HRH3Q9Y5N1 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HRH3Q9Y5N1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
HRH3Q9Y5N1 AC004687.1-201ENST00000579003 1625 ntBASIC20.21■□□□□ 0.83
HRH3Q9Y5N1 IRS3P-201ENST00000223076 1006 ntBASIC20.21■□□□□ 0.83
HRH3Q9Y5N1 SLC47A1P1-202ENST00000449666 945 ntBASIC20.21■□□□□ 0.83
HRH3Q9Y5N1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
HRH3Q9Y5N1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HRH3Q9Y5N1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.21■□□□□ 0.83
HRH3Q9Y5N1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HRH3Q9Y5N1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.21■□□□□ 0.83
HRH3Q9Y5N1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HRH3Q9Y5N1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HRH3Q9Y5N1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HRH3Q9Y5N1 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
HRH3Q9Y5N1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HRH3Q9Y5N1 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HRH3Q9Y5N1 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.2■□□□□ 0.82
HRH3Q9Y5N1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HRH3Q9Y5N1 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HRH3Q9Y5N1 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.2■□□□□ 0.82
HRH3Q9Y5N1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HRH3Q9Y5N1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HRH3Q9Y5N1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HRH3Q9Y5N1 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.2■□□□□ 0.82
HRH3Q9Y5N1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.2■□□□□ 0.82
HRH3Q9Y5N1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.2■□□□□ 0.82
HRH3Q9Y5N1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.2■□□□□ 0.82
HRH3Q9Y5N1 AC233992.3-201ENST00000607491 485 ntBASIC20.2■□□□□ 0.82
HRH3Q9Y5N1 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.2■□□□□ 0.82
HRH3Q9Y5N1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.2■□□□□ 0.82
HRH3Q9Y5N1 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HRH3Q9Y5N1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HRH3Q9Y5N1 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HRH3Q9Y5N1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HRH3Q9Y5N1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
HRH3Q9Y5N1 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HRH3Q9Y5N1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
HRH3Q9Y5N1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HRH3Q9Y5N1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.19■□□□□ 0.82
HRH3Q9Y5N1 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HRH3Q9Y5N1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms