Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.76■□□□□ 0.91
AP4S1Q9Y587 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
AP4S1Q9Y587 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
AP4S1Q9Y587 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
AP4S1Q9Y587 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
AP4S1Q9Y587 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
AP4S1Q9Y587 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
AP4S1Q9Y587 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP4S1Q9Y587 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
AP4S1Q9Y587 ABHD17AP4-201ENST00000411545 909 ntBASIC20.75■□□□□ 0.91
AP4S1Q9Y587 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.75■□□□□ 0.91
AP4S1Q9Y587 AC087393.1-201ENST00000582896 145 ntBASIC20.75■□□□□ 0.91
AP4S1Q9Y587 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
AP4S1Q9Y587 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP4S1Q9Y587 AC009831.1-201ENST00000580420 1582 ntBASIC20.75■□□□□ 0.91
AP4S1Q9Y587 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
AP4S1Q9Y587 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP4S1Q9Y587 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.75■□□□□ 0.91
AP4S1Q9Y587 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP4S1Q9Y587 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.74■□□□□ 0.91
AP4S1Q9Y587 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP4S1Q9Y587 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP4S1Q9Y587 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP4S1Q9Y587 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP4S1Q9Y587 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP4S1Q9Y587 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP4S1Q9Y587 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
AP4S1Q9Y587 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP4S1Q9Y587 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP4S1Q9Y587 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
AP4S1Q9Y587 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.74■□□□□ 0.91
AP4S1Q9Y587 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
AP4S1Q9Y587 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.73■□□□□ 0.91
AP4S1Q9Y587 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP4S1Q9Y587 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
AP4S1Q9Y587 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
AP4S1Q9Y587 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.73■□□□□ 0.91
AP4S1Q9Y587 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.73■□□□□ 0.91
AP4S1Q9Y587 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
AP4S1Q9Y587 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP4S1Q9Y587 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
AP4S1Q9Y587 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
AP4S1Q9Y587 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
AP4S1Q9Y587 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
AP4S1Q9Y587 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP4S1Q9Y587 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.72■□□□□ 0.91
AP4S1Q9Y587 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
AP4S1Q9Y587 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
AP4S1Q9Y587 AC018755.3-202ENST00000596210 929 ntBASIC20.72■□□□□ 0.91
AP4S1Q9Y587 AC133552.2-201ENST00000619106 1032 ntBASIC20.72■□□□□ 0.91
AP4S1Q9Y587 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
AP4S1Q9Y587 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
AP4S1Q9Y587 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
AP4S1Q9Y587 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
AP4S1Q9Y587 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
AP4S1Q9Y587 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
AP4S1Q9Y587 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.71■□□□□ 0.91
AP4S1Q9Y587 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.71■□□□□ 0.91
AP4S1Q9Y587 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
AP4S1Q9Y587 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
AP4S1Q9Y587 AC011551.1-201ENST00000614101 683 ntBASIC20.71■□□□□ 0.91
AP4S1Q9Y587 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
AP4S1Q9Y587 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
AP4S1Q9Y587 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
AP4S1Q9Y587 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.71■□□□□ 0.91
AP4S1Q9Y587 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
AP4S1Q9Y587 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
AP4S1Q9Y587 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
AP4S1Q9Y587 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.7■□□□□ 0.9
AP4S1Q9Y587 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
AP4S1Q9Y587 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AP4S1Q9Y587 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.7■□□□□ 0.9
AP4S1Q9Y587 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AP4S1Q9Y587 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AP4S1Q9Y587 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
AP4S1Q9Y587 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
AP4S1Q9Y587 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.7■□□□□ 0.9
AP4S1Q9Y587 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
AP4S1Q9Y587 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
AP4S1Q9Y587 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
AP4S1Q9Y587 AC244015.2-201ENST00000616358 1861 ntBASIC20.69■□□□□ 0.9
AP4S1Q9Y587 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
AP4S1Q9Y587 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
AP4S1Q9Y587 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.69■□□□□ 0.9
AP4S1Q9Y587 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
AP4S1Q9Y587 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
AP4S1Q9Y587 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
AP4S1Q9Y587 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
AP4S1Q9Y587 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
AP4S1Q9Y587 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
AP4S1Q9Y587 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
AP4S1Q9Y587 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
AP4S1Q9Y587 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.69■□□□□ 0.9
AP4S1Q9Y587 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.69■□□□□ 0.9
AP4S1Q9Y587 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.68■□□□□ 0.9
AP4S1Q9Y587 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
AP4S1Q9Y587 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
AP4S1Q9Y587 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
AP4S1Q9Y587 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
AP4S1Q9Y587 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms