Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MRPS28Q9Y2Q9 FP325331.1-202ENST00000623531 1380 ntBASIC18.9■□□□□ 0.62
MRPS28Q9Y2Q9 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MRPS28Q9Y2Q9 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
MRPS28Q9Y2Q9 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
MRPS28Q9Y2Q9 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MRPS28Q9Y2Q9 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
MRPS28Q9Y2Q9 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MRPS28Q9Y2Q9 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
MRPS28Q9Y2Q9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
MRPS28Q9Y2Q9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.89■□□□□ 0.61
MRPS28Q9Y2Q9 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MRPS28Q9Y2Q9 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
MRPS28Q9Y2Q9 FBXW4P1-201ENST00000426721 2239 ntBASIC18.89■□□□□ 0.61
MRPS28Q9Y2Q9 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
MRPS28Q9Y2Q9 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MRPS28Q9Y2Q9 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.89■□□□□ 0.61
MRPS28Q9Y2Q9 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MRPS28Q9Y2Q9 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
MRPS28Q9Y2Q9 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MRPS28Q9Y2Q9 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MRPS28Q9Y2Q9 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.88■□□□□ 0.61
MRPS28Q9Y2Q9 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
MRPS28Q9Y2Q9 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.88■□□□□ 0.61
MRPS28Q9Y2Q9 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.88■□□□□ 0.61
MRPS28Q9Y2Q9 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.88■□□□□ 0.61
MRPS28Q9Y2Q9 MIR6722-201ENST00000617286 78 ntBASIC18.88■□□□□ 0.61
MRPS28Q9Y2Q9 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MRPS28Q9Y2Q9 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
MRPS28Q9Y2Q9 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MRPS28Q9Y2Q9 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.88■□□□□ 0.61
MRPS28Q9Y2Q9 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MRPS28Q9Y2Q9 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.88■□□□□ 0.61
MRPS28Q9Y2Q9 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MRPS28Q9Y2Q9 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
MRPS28Q9Y2Q9 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
MRPS28Q9Y2Q9 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MRPS28Q9Y2Q9 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MRPS28Q9Y2Q9 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MRPS28Q9Y2Q9 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
MRPS28Q9Y2Q9 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MRPS28Q9Y2Q9 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
MRPS28Q9Y2Q9 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
MRPS28Q9Y2Q9 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MRPS28Q9Y2Q9 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.87■□□□□ 0.61
MRPS28Q9Y2Q9 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
MRPS28Q9Y2Q9 AL031848.2-201ENST00000607670 837 ntBASIC18.87■□□□□ 0.61
MRPS28Q9Y2Q9 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.87■□□□□ 0.61
MRPS28Q9Y2Q9 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
MRPS28Q9Y2Q9 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.86■□□□□ 0.61
MRPS28Q9Y2Q9 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.86■□□□□ 0.61
MRPS28Q9Y2Q9 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
MRPS28Q9Y2Q9 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
MRPS28Q9Y2Q9 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
MRPS28Q9Y2Q9 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.86■□□□□ 0.61
MRPS28Q9Y2Q9 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.86■□□□□ 0.61
MRPS28Q9Y2Q9 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
MRPS28Q9Y2Q9 AC009086.3-201ENST00000623486 1008 ntBASIC18.86■□□□□ 0.61
MRPS28Q9Y2Q9 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MRPS28Q9Y2Q9 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MRPS28Q9Y2Q9 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MRPS28Q9Y2Q9 LINC01960-201ENST00000563759 1884 ntBASIC18.86■□□□□ 0.61
MRPS28Q9Y2Q9 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MRPS28Q9Y2Q9 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MRPS28Q9Y2Q9 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MRPS28Q9Y2Q9 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MRPS28Q9Y2Q9 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MRPS28Q9Y2Q9 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
MRPS28Q9Y2Q9 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MRPS28Q9Y2Q9 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
MRPS28Q9Y2Q9 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
MRPS28Q9Y2Q9 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.85■□□□□ 0.61
MRPS28Q9Y2Q9 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.85■□□□□ 0.61
MRPS28Q9Y2Q9 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
MRPS28Q9Y2Q9 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MRPS28Q9Y2Q9 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
MRPS28Q9Y2Q9 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MRPS28Q9Y2Q9 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MRPS28Q9Y2Q9 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.84■□□□□ 0.61
MRPS28Q9Y2Q9 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MRPS28Q9Y2Q9 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MRPS28Q9Y2Q9 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
MRPS28Q9Y2Q9 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MRPS28Q9Y2Q9 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
MRPS28Q9Y2Q9 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MRPS28Q9Y2Q9 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MRPS28Q9Y2Q9 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.84■□□□□ 0.61
MRPS28Q9Y2Q9 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MRPS28Q9Y2Q9 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
MRPS28Q9Y2Q9 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
MRPS28Q9Y2Q9 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
MRPS28Q9Y2Q9 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
MRPS28Q9Y2Q9 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
MRPS28Q9Y2Q9 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.83■□□□□ 0.61
MRPS28Q9Y2Q9 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MRPS28Q9Y2Q9 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.83■□□□□ 0.61
MRPS28Q9Y2Q9 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
MRPS28Q9Y2Q9 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
MRPS28Q9Y2Q9 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.83■□□□□ 0.6
MRPS28Q9Y2Q9 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms