Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
FNDC3AQ9Y2H6 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
FNDC3AQ9Y2H6 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
FNDC3AQ9Y2H6 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
FNDC3AQ9Y2H6 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
FNDC3AQ9Y2H6 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.35■■□□□ 1.17
FNDC3AQ9Y2H6 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC22.35■■□□□ 1.17
FNDC3AQ9Y2H6 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.35■■□□□ 1.17
FNDC3AQ9Y2H6 AC092068.2-201ENST00000590491 1708 ntBASIC22.35■■□□□ 1.17
FNDC3AQ9Y2H6 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
FNDC3AQ9Y2H6 BX842568.3-201ENST00000418104 571 ntBASIC22.35■■□□□ 1.17
FNDC3AQ9Y2H6 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.35■■□□□ 1.17
FNDC3AQ9Y2H6 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
FNDC3AQ9Y2H6 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC22.35■■□□□ 1.17
FNDC3AQ9Y2H6 MIR3181-201ENST00000578512 73 ntBASIC22.35■■□□□ 1.17
FNDC3AQ9Y2H6 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.35■■□□□ 1.17
FNDC3AQ9Y2H6 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
FNDC3AQ9Y2H6 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
FNDC3AQ9Y2H6 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
FNDC3AQ9Y2H6 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
FNDC3AQ9Y2H6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
FNDC3AQ9Y2H6 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.34■■□□□ 1.17
FNDC3AQ9Y2H6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
FNDC3AQ9Y2H6 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
FNDC3AQ9Y2H6 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.34■■□□□ 1.17
FNDC3AQ9Y2H6 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
FNDC3AQ9Y2H6 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
FNDC3AQ9Y2H6 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
FNDC3AQ9Y2H6 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
FNDC3AQ9Y2H6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
FNDC3AQ9Y2H6 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
FNDC3AQ9Y2H6 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC22.33■■□□□ 1.17
FNDC3AQ9Y2H6 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
FNDC3AQ9Y2H6 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
FNDC3AQ9Y2H6 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
FNDC3AQ9Y2H6 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
FNDC3AQ9Y2H6 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
FNDC3AQ9Y2H6 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
FNDC3AQ9Y2H6 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
FNDC3AQ9Y2H6 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
FNDC3AQ9Y2H6 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
FNDC3AQ9Y2H6 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
FNDC3AQ9Y2H6 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
FNDC3AQ9Y2H6 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
FNDC3AQ9Y2H6 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.32■■□□□ 1.16
FNDC3AQ9Y2H6 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
FNDC3AQ9Y2H6 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
FNDC3AQ9Y2H6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
FNDC3AQ9Y2H6 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.31■■□□□ 1.16
FNDC3AQ9Y2H6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
FNDC3AQ9Y2H6 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
FNDC3AQ9Y2H6 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
FNDC3AQ9Y2H6 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.31■■□□□ 1.16
FNDC3AQ9Y2H6 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
FNDC3AQ9Y2H6 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
FNDC3AQ9Y2H6 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
FNDC3AQ9Y2H6 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.31■■□□□ 1.16
FNDC3AQ9Y2H6 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.3■■□□□ 1.16
FNDC3AQ9Y2H6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.3■■□□□ 1.16
FNDC3AQ9Y2H6 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
FNDC3AQ9Y2H6 LINC01529-204ENST00000636474 1715 ntBASIC22.3■■□□□ 1.16
FNDC3AQ9Y2H6 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
FNDC3AQ9Y2H6 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
FNDC3AQ9Y2H6 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
FNDC3AQ9Y2H6 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.3■■□□□ 1.16
FNDC3AQ9Y2H6 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.29■■□□□ 1.16
FNDC3AQ9Y2H6 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.29■■□□□ 1.16
FNDC3AQ9Y2H6 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
FNDC3AQ9Y2H6 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.29■■□□□ 1.16
FNDC3AQ9Y2H6 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.29■■□□□ 1.16
FNDC3AQ9Y2H6 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
FNDC3AQ9Y2H6 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
FNDC3AQ9Y2H6 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
FNDC3AQ9Y2H6 IKBKGP1-201ENST00000612193 1073 ntBASIC22.29■■□□□ 1.16
FNDC3AQ9Y2H6 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
FNDC3AQ9Y2H6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.29■■□□□ 1.16
FNDC3AQ9Y2H6 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.29■■□□□ 1.16
FNDC3AQ9Y2H6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
FNDC3AQ9Y2H6 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
FNDC3AQ9Y2H6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
FNDC3AQ9Y2H6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
FNDC3AQ9Y2H6 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.28■■□□□ 1.16
FNDC3AQ9Y2H6 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.28■■□□□ 1.16
FNDC3AQ9Y2H6 AC034268.1-201ENST00000441047 882 ntBASIC22.28■■□□□ 1.16
FNDC3AQ9Y2H6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.28■■□□□ 1.16
FNDC3AQ9Y2H6 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
FNDC3AQ9Y2H6 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
FNDC3AQ9Y2H6 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
FNDC3AQ9Y2H6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
FNDC3AQ9Y2H6 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
FNDC3AQ9Y2H6 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
FNDC3AQ9Y2H6 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
FNDC3AQ9Y2H6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
FNDC3AQ9Y2H6 AC090192.1-201ENST00000517740 490 ntBASIC22.27■■□□□ 1.16
FNDC3AQ9Y2H6 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.27■■□□□ 1.16
FNDC3AQ9Y2H6 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC22.27■■□□□ 1.16
FNDC3AQ9Y2H6 AL031602.1-201ENST00000633169 911 ntBASIC22.27■■□□□ 1.16
FNDC3AQ9Y2H6 RARRES2P11-201ENST00000635158 484 ntBASIC22.27■■□□□ 1.16
FNDC3AQ9Y2H6 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.27■■□□□ 1.16
FNDC3AQ9Y2H6 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms