Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC34.33■■■■□ 3.09
CDK11AQ9UQ88 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
CDK11AQ9UQ88 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
CDK11AQ9UQ88 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
CDK11AQ9UQ88 SMUG1P1-201ENST00000590640 811 ntBASIC34.33■■■■□ 3.09
CDK11AQ9UQ88 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC34.33■■■■□ 3.09
CDK11AQ9UQ88 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC34.33■■■■□ 3.09
CDK11AQ9UQ88 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC34.32■■■■□ 3.09
CDK11AQ9UQ88 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC34.32■■■■□ 3.08
CDK11AQ9UQ88 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC34.32■■■■□ 3.08
CDK11AQ9UQ88 BID-214ENST00000617586 542 ntTSL 5 BASIC34.32■■■■□ 3.08
CDK11AQ9UQ88 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
CDK11AQ9UQ88 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC34.31■■■■□ 3.08
CDK11AQ9UQ88 AC026185.1-201ENST00000445748 174 ntBASIC34.31■■■■□ 3.08
CDK11AQ9UQ88 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC34.31■■■■□ 3.08
CDK11AQ9UQ88 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC34.31■■■■□ 3.08
CDK11AQ9UQ88 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC34.31■■■■□ 3.08
CDK11AQ9UQ88 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC34.31■■■■□ 3.08
CDK11AQ9UQ88 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC34.31■■■■□ 3.08
CDK11AQ9UQ88 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
CDK11AQ9UQ88 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
CDK11AQ9UQ88 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
CDK11AQ9UQ88 WWOX-218ENST00000627394 894 ntTSL 5 BASIC34.3■■■■□ 3.08
CDK11AQ9UQ88 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
CDK11AQ9UQ88 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC34.3■■■■□ 3.08
CDK11AQ9UQ88 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
CDK11AQ9UQ88 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
CDK11AQ9UQ88 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
CDK11AQ9UQ88 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
CDK11AQ9UQ88 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC34.29■■■■□ 3.08
CDK11AQ9UQ88 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC34.29■■■■□ 3.08
CDK11AQ9UQ88 GXYLT1P5-201ENST00000614548 1189 ntBASIC34.29■■■■□ 3.08
CDK11AQ9UQ88 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC34.29■■■■□ 3.08
CDK11AQ9UQ88 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
CDK11AQ9UQ88 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
CDK11AQ9UQ88 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
CDK11AQ9UQ88 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
CDK11AQ9UQ88 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC34.28■■■■□ 3.08
CDK11AQ9UQ88 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC34.28■■■■□ 3.08
CDK11AQ9UQ88 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC34.28■■■■□ 3.08
CDK11AQ9UQ88 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC34.28■■■■□ 3.08
CDK11AQ9UQ88 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC34.28■■■■□ 3.08
CDK11AQ9UQ88 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
CDK11AQ9UQ88 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
CDK11AQ9UQ88 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC34.27■■■■□ 3.08
CDK11AQ9UQ88 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
CDK11AQ9UQ88 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC34.27■■■■□ 3.08
CDK11AQ9UQ88 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC34.27■■■■□ 3.08
CDK11AQ9UQ88 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC34.27■■■■□ 3.08
CDK11AQ9UQ88 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
CDK11AQ9UQ88 CPT2-209ENST00000636935 803 ntTSL 5 BASIC34.27■■■■□ 3.08
CDK11AQ9UQ88 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
CDK11AQ9UQ88 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
CDK11AQ9UQ88 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC34.27■■■■□ 3.08
CDK11AQ9UQ88 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC34.26■■■■□ 3.08
CDK11AQ9UQ88 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC34.26■■■■□ 3.08
CDK11AQ9UQ88 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC34.26■■■■□ 3.08
CDK11AQ9UQ88 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC34.26■■■■□ 3.08
CDK11AQ9UQ88 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC34.26■■■■□ 3.07
CDK11AQ9UQ88 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
CDK11AQ9UQ88 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
CDK11AQ9UQ88 LINC00543-201ENST00000567234 1845 ntBASIC34.25■■■■□ 3.07
CDK11AQ9UQ88 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
CDK11AQ9UQ88 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
CDK11AQ9UQ88 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC34.25■■■■□ 3.07
CDK11AQ9UQ88 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC34.25■■■■□ 3.07
CDK11AQ9UQ88 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC34.25■■■■□ 3.07
CDK11AQ9UQ88 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC34.24■■■■□ 3.07
CDK11AQ9UQ88 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC34.24■■■■□ 3.07
CDK11AQ9UQ88 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC34.24■■■■□ 3.07
CDK11AQ9UQ88 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC34.24■■■■□ 3.07
CDK11AQ9UQ88 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
CDK11AQ9UQ88 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC34.24■■■■□ 3.07
CDK11AQ9UQ88 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC34.24■■■■□ 3.07
CDK11AQ9UQ88 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC34.24■■■■□ 3.07
CDK11AQ9UQ88 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC34.24■■■■□ 3.07
CDK11AQ9UQ88 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
CDK11AQ9UQ88 METTL26-203ENST00000397664 604 ntTSL 2 BASIC34.23■■■■□ 3.07
CDK11AQ9UQ88 KRT18P11-201ENST00000435214 1283 ntBASIC34.23■■■■□ 3.07
CDK11AQ9UQ88 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
CDK11AQ9UQ88 PPP1R14BP3-201ENST00000509033 445 ntBASIC34.23■■■■□ 3.07
CDK11AQ9UQ88 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC34.23■■■■□ 3.07
CDK11AQ9UQ88 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC34.23■■■■□ 3.07
CDK11AQ9UQ88 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
CDK11AQ9UQ88 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC34.23■■■■□ 3.07
CDK11AQ9UQ88 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC34.23■■■■□ 3.07
CDK11AQ9UQ88 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
CDK11AQ9UQ88 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC34.22■■■■□ 3.07
CDK11AQ9UQ88 OXCT2P1-201ENST00000447263 1535 ntBASIC34.22■■■■□ 3.07
CDK11AQ9UQ88 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC34.22■■■■□ 3.07
CDK11AQ9UQ88 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC34.22■■■■□ 3.07
CDK11AQ9UQ88 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC34.22■■■■□ 3.07
CDK11AQ9UQ88 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC34.22■■■■□ 3.07
CDK11AQ9UQ88 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC34.22■■■■□ 3.07
CDK11AQ9UQ88 EMC9-206ENST00000560403 872 ntTSL 2 BASIC34.22■■■■□ 3.07
CDK11AQ9UQ88 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC34.22■■■■□ 3.07
CDK11AQ9UQ88 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
CDK11AQ9UQ88 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC34.22■■■■□ 3.07
CDK11AQ9UQ88 AL353803.4-201ENST00000565882 1934 ntBASIC34.22■■■■□ 3.07
CDK11AQ9UQ88 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms