Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC9.27□□□□□ -0.92
MACF1Q9UPN3 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
MACF1Q9UPN3 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC9.27□□□□□ -0.92
MACF1Q9UPN3 KRT18P56-201ENST00000507275 550 ntBASIC9.27□□□□□ -0.93
MACF1Q9UPN3 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
MACF1Q9UPN3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC9.27□□□□□ -0.93
MACF1Q9UPN3 CYP2T3P-201ENST00000601990 817 ntBASIC9.27□□□□□ -0.93
MACF1Q9UPN3 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
MACF1Q9UPN3 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC9.27□□□□□ -0.93
MACF1Q9UPN3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
MACF1Q9UPN3 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
MACF1Q9UPN3 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
MACF1Q9UPN3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
MACF1Q9UPN3 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
MACF1Q9UPN3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC9.27□□□□□ -0.93
MACF1Q9UPN3 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
MACF1Q9UPN3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
MACF1Q9UPN3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC9.27□□□□□ -0.93
MACF1Q9UPN3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC9.27□□□□□ -0.93
MACF1Q9UPN3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
MACF1Q9UPN3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC9.27□□□□□ -0.93
MACF1Q9UPN3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC9.27□□□□□ -0.93
MACF1Q9UPN3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC9.26□□□□□ -0.93
MACF1Q9UPN3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC9.26□□□□□ -0.93
MACF1Q9UPN3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC9.26□□□□□ -0.93
MACF1Q9UPN3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
MACF1Q9UPN3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
MACF1Q9UPN3 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
MACF1Q9UPN3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC9.26□□□□□ -0.93
MACF1Q9UPN3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC9.26□□□□□ -0.93
MACF1Q9UPN3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
MACF1Q9UPN3 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
MACF1Q9UPN3 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC9.26□□□□□ -0.93
MACF1Q9UPN3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
MACF1Q9UPN3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC9.26□□□□□ -0.93
MACF1Q9UPN3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC9.26□□□□□ -0.93
MACF1Q9UPN3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
MACF1Q9UPN3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
MACF1Q9UPN3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
MACF1Q9UPN3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC9.26□□□□□ -0.93
MACF1Q9UPN3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC9.26□□□□□ -0.93
MACF1Q9UPN3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
MACF1Q9UPN3 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
MACF1Q9UPN3 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
MACF1Q9UPN3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
MACF1Q9UPN3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
MACF1Q9UPN3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC9.26□□□□□ -0.93
MACF1Q9UPN3 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
MACF1Q9UPN3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
MACF1Q9UPN3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC9.26□□□□□ -0.93
MACF1Q9UPN3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC9.26□□□□□ -0.93
MACF1Q9UPN3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC9.25□□□□□ -0.93
MACF1Q9UPN3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC9.25□□□□□ -0.93
MACF1Q9UPN3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC9.25□□□□□ -0.93
MACF1Q9UPN3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
MACF1Q9UPN3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
MACF1Q9UPN3 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
MACF1Q9UPN3 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
MACF1Q9UPN3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
MACF1Q9UPN3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
MACF1Q9UPN3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC9.25□□□□□ -0.93
MACF1Q9UPN3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC9.25□□□□□ -0.93
MACF1Q9UPN3 TSPY15P-201ENST00000457163 923 ntBASIC9.25□□□□□ -0.93
MACF1Q9UPN3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC9.25□□□□□ -0.93
MACF1Q9UPN3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC9.25□□□□□ -0.93
MACF1Q9UPN3 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
MACF1Q9UPN3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
MACF1Q9UPN3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
MACF1Q9UPN3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
MACF1Q9UPN3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC9.25□□□□□ -0.93
MACF1Q9UPN3 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
MACF1Q9UPN3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
MACF1Q9UPN3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
MACF1Q9UPN3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
MACF1Q9UPN3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC9.25□□□□□ -0.93
MACF1Q9UPN3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
MACF1Q9UPN3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC9.25□□□□□ -0.93
MACF1Q9UPN3 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC9.25□□□□□ -0.93
MACF1Q9UPN3 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC9.25□□□□□ -0.93
MACF1Q9UPN3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC9.25□□□□□ -0.93
MACF1Q9UPN3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
MACF1Q9UPN3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC9.25□□□□□ -0.93
MACF1Q9UPN3 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
MACF1Q9UPN3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC9.25□□□□□ -0.93
MACF1Q9UPN3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
MACF1Q9UPN3 HES2-205ENST00000487437 968 ntTSL 3 BASIC9.25□□□□□ -0.93
MACF1Q9UPN3 RPPH1-201ENST00000516869 333 ntBASIC9.25□□□□□ -0.93
MACF1Q9UPN3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
MACF1Q9UPN3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC9.24□□□□□ -0.93
MACF1Q9UPN3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC9.24□□□□□ -0.93
MACF1Q9UPN3 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
MACF1Q9UPN3 AC008403.3-201ENST00000598924 454 ntBASIC9.24□□□□□ -0.93
MACF1Q9UPN3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC9.24□□□□□ -0.93
MACF1Q9UPN3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC9.24□□□□□ -0.93
MACF1Q9UPN3 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
MACF1Q9UPN3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
MACF1Q9UPN3 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
MACF1Q9UPN3 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC9.24□□□□□ -0.93
MACF1Q9UPN3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
MACF1Q9UPN3 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms