Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC24.81■■□□□ 1.56
PDLIM7Q9NR12 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC24.81■■□□□ 1.56
PDLIM7Q9NR12 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC24.81■■□□□ 1.56
PDLIM7Q9NR12 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC24.81■■□□□ 1.56
PDLIM7Q9NR12 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PDLIM7Q9NR12 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PDLIM7Q9NR12 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.81■■□□□ 1.56
PDLIM7Q9NR12 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
PDLIM7Q9NR12 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
PDLIM7Q9NR12 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC24.8■■□□□ 1.56
PDLIM7Q9NR12 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC24.8■■□□□ 1.56
PDLIM7Q9NR12 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC24.8■■□□□ 1.56
PDLIM7Q9NR12 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC24.8■■□□□ 1.56
PDLIM7Q9NR12 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
PDLIM7Q9NR12 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
PDLIM7Q9NR12 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.79■■□□□ 1.56
PDLIM7Q9NR12 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC24.79■■□□□ 1.56
PDLIM7Q9NR12 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
PDLIM7Q9NR12 AL499627.2-201ENST00000606283 725 ntBASIC24.79■■□□□ 1.56
PDLIM7Q9NR12 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
PDLIM7Q9NR12 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PDLIM7Q9NR12 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PDLIM7Q9NR12 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
PDLIM7Q9NR12 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PDLIM7Q9NR12 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PDLIM7Q9NR12 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PDLIM7Q9NR12 LINC01529-204ENST00000636474 1715 ntBASIC24.78■■□□□ 1.56
PDLIM7Q9NR12 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PDLIM7Q9NR12 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC24.78■■□□□ 1.56
PDLIM7Q9NR12 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC24.78■■□□□ 1.56
PDLIM7Q9NR12 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC24.78■■□□□ 1.56
PDLIM7Q9NR12 AC016769.1-201ENST00000409132 1010 ntBASIC24.78■■□□□ 1.56
PDLIM7Q9NR12 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC24.78■■□□□ 1.56
PDLIM7Q9NR12 AC137761.2-201ENST00000561729 223 ntBASIC24.78■■□□□ 1.56
PDLIM7Q9NR12 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC24.78■■□□□ 1.56
PDLIM7Q9NR12 AC145350.3-201ENST00000569033 163 ntBASIC24.78■■□□□ 1.56
PDLIM7Q9NR12 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC24.78■■□□□ 1.56
PDLIM7Q9NR12 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
PDLIM7Q9NR12 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC24.77■■□□□ 1.56
PDLIM7Q9NR12 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PDLIM7Q9NR12 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
PDLIM7Q9NR12 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
PDLIM7Q9NR12 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC24.77■■□□□ 1.56
PDLIM7Q9NR12 OR2I1P-207ENST00000453522 948 ntBASIC24.77■■□□□ 1.56
PDLIM7Q9NR12 PPP1R14BP3-201ENST00000509033 445 ntBASIC24.77■■□□□ 1.56
PDLIM7Q9NR12 GAS2L1P2-201ENST00000436355 1356 ntBASIC24.77■■□□□ 1.56
PDLIM7Q9NR12 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC24.77■■□□□ 1.56
PDLIM7Q9NR12 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
PDLIM7Q9NR12 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PDLIM7Q9NR12 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PDLIM7Q9NR12 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC24.76■■□□□ 1.55
PDLIM7Q9NR12 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
PDLIM7Q9NR12 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PDLIM7Q9NR12 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
PDLIM7Q9NR12 MAP2K4P1-201ENST00000438453 1195 ntBASIC24.76■■□□□ 1.55
PDLIM7Q9NR12 AC026185.1-201ENST00000445748 174 ntBASIC24.76■■□□□ 1.55
PDLIM7Q9NR12 AP005435.1-201ENST00000529293 1178 ntBASIC24.76■■□□□ 1.55
PDLIM7Q9NR12 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PDLIM7Q9NR12 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
PDLIM7Q9NR12 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PDLIM7Q9NR12 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
PDLIM7Q9NR12 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC24.76■■□□□ 1.55
PDLIM7Q9NR12 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PDLIM7Q9NR12 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PDLIM7Q9NR12 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC24.75■■□□□ 1.55
PDLIM7Q9NR12 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PDLIM7Q9NR12 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
PDLIM7Q9NR12 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PDLIM7Q9NR12 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC24.75■■□□□ 1.55
PDLIM7Q9NR12 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC24.75■■□□□ 1.55
PDLIM7Q9NR12 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC24.75■■□□□ 1.55
PDLIM7Q9NR12 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC24.75■■□□□ 1.55
PDLIM7Q9NR12 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC24.75■■□□□ 1.55
PDLIM7Q9NR12 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
PDLIM7Q9NR12 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
PDLIM7Q9NR12 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PDLIM7Q9NR12 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.74■■□□□ 1.55
PDLIM7Q9NR12 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
PDLIM7Q9NR12 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PDLIM7Q9NR12 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC24.74■■□□□ 1.55
PDLIM7Q9NR12 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC24.74■■□□□ 1.55
PDLIM7Q9NR12 GALNS-213ENST00000569433 723 ntTSL 3 BASIC24.74■■□□□ 1.55
PDLIM7Q9NR12 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC24.74■■□□□ 1.55
PDLIM7Q9NR12 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
PDLIM7Q9NR12 AC105233.4-201ENST00000642045 216 ntBASIC24.74■■□□□ 1.55
PDLIM7Q9NR12 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PDLIM7Q9NR12 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PDLIM7Q9NR12 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PDLIM7Q9NR12 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PDLIM7Q9NR12 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
PDLIM7Q9NR12 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
PDLIM7Q9NR12 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC24.73■■□□□ 1.55
PDLIM7Q9NR12 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC24.73■■□□□ 1.55
PDLIM7Q9NR12 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC24.73■■□□□ 1.55
PDLIM7Q9NR12 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PDLIM7Q9NR12 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PDLIM7Q9NR12 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PDLIM7Q9NR12 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC24.73■■□□□ 1.55
PDLIM7Q9NR12 STX7-201ENST00000367937 1090 ntTSL 5 BASIC24.73■■□□□ 1.55
PDLIM7Q9NR12 HSCB-202ENST00000398941 955 ntTSL 2 BASIC24.73■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms