Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.98■□□□□ 0.95
NECTIN3Q9NQS3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
NECTIN3Q9NQS3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.98■□□□□ 0.95
NECTIN3Q9NQS3 SYT6-210ENST00000641643 1587 ntBASIC20.98■□□□□ 0.95
NECTIN3Q9NQS3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
NECTIN3Q9NQS3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NECTIN3Q9NQS3 SERBP1P1-201ENST00000396021 1160 ntBASIC20.98■□□□□ 0.95
NECTIN3Q9NQS3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.98■□□□□ 0.95
NECTIN3Q9NQS3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NECTIN3Q9NQS3 DUX4L19-201ENST00000557448 1267 ntBASIC20.98■□□□□ 0.95
NECTIN3Q9NQS3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.98■□□□□ 0.95
NECTIN3Q9NQS3 ANOS2P-203ENST00000472227 1816 ntBASIC20.98■□□□□ 0.95
NECTIN3Q9NQS3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NECTIN3Q9NQS3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
NECTIN3Q9NQS3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.98■□□□□ 0.95
NECTIN3Q9NQS3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NECTIN3Q9NQS3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NECTIN3Q9NQS3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.97■□□□□ 0.95
NECTIN3Q9NQS3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
NECTIN3Q9NQS3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NECTIN3Q9NQS3 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.97■□□□□ 0.95
NECTIN3Q9NQS3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NECTIN3Q9NQS3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.97■□□□□ 0.95
NECTIN3Q9NQS3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NECTIN3Q9NQS3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.97■□□□□ 0.95
NECTIN3Q9NQS3 AL136162.1-201ENST00000607711 1078 ntBASIC20.97■□□□□ 0.95
NECTIN3Q9NQS3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.97■□□□□ 0.95
NECTIN3Q9NQS3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NECTIN3Q9NQS3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NECTIN3Q9NQS3 AC127496.7-201ENST00000625110 1798 ntBASIC20.97■□□□□ 0.95
NECTIN3Q9NQS3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.97■□□□□ 0.95
NECTIN3Q9NQS3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NECTIN3Q9NQS3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.97■□□□□ 0.95
NECTIN3Q9NQS3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NECTIN3Q9NQS3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NECTIN3Q9NQS3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NECTIN3Q9NQS3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NECTIN3Q9NQS3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
NECTIN3Q9NQS3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.96■□□□□ 0.95
NECTIN3Q9NQS3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
NECTIN3Q9NQS3 LINC01529-204ENST00000636474 1715 ntBASIC20.95■□□□□ 0.94
NECTIN3Q9NQS3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
NECTIN3Q9NQS3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
NECTIN3Q9NQS3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.95■□□□□ 0.94
NECTIN3Q9NQS3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
NECTIN3Q9NQS3 PBX2P1-201ENST00000493219 1291 ntBASIC20.95■□□□□ 0.94
NECTIN3Q9NQS3 AC024257.2-201ENST00000549699 147 ntBASIC20.95■□□□□ 0.94
NECTIN3Q9NQS3 DUX4L4-201ENST00000566884 1269 ntBASIC20.95■□□□□ 0.94
NECTIN3Q9NQS3 MIR3181-201ENST00000578512 73 ntBASIC20.95■□□□□ 0.94
NECTIN3Q9NQS3 pRNA.6-201ENST00000610482 90 ntBASIC20.95■□□□□ 0.94
NECTIN3Q9NQS3 pRNA.5-201ENST00000612139 90 ntBASIC20.95■□□□□ 0.94
NECTIN3Q9NQS3 pRNA.11-201ENST00000618423 90 ntBASIC20.95■□□□□ 0.94
NECTIN3Q9NQS3 pRNA.13-201ENST00000619112 90 ntBASIC20.95■□□□□ 0.94
NECTIN3Q9NQS3 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.95■□□□□ 0.94
NECTIN3Q9NQS3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.95■□□□□ 0.94
NECTIN3Q9NQS3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NECTIN3Q9NQS3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.95■□□□□ 0.94
NECTIN3Q9NQS3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NECTIN3Q9NQS3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NECTIN3Q9NQS3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NECTIN3Q9NQS3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.94■□□□□ 0.94
NECTIN3Q9NQS3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.94■□□□□ 0.94
NECTIN3Q9NQS3 LINC00526-201ENST00000581067 1875 ntBASIC20.94■□□□□ 0.94
NECTIN3Q9NQS3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NECTIN3Q9NQS3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NECTIN3Q9NQS3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NECTIN3Q9NQS3 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
NECTIN3Q9NQS3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NECTIN3Q9NQS3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
NECTIN3Q9NQS3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
NECTIN3Q9NQS3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
NECTIN3Q9NQS3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NECTIN3Q9NQS3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.94■□□□□ 0.94
NECTIN3Q9NQS3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NECTIN3Q9NQS3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NECTIN3Q9NQS3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NECTIN3Q9NQS3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
NECTIN3Q9NQS3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NECTIN3Q9NQS3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.93■□□□□ 0.94
NECTIN3Q9NQS3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NECTIN3Q9NQS3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.93■□□□□ 0.94
NECTIN3Q9NQS3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NECTIN3Q9NQS3 AC106739.1-201ENST00000617035 715 ntBASIC20.93■□□□□ 0.94
NECTIN3Q9NQS3 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.93■□□□□ 0.94
NECTIN3Q9NQS3 AL353803.4-201ENST00000565882 1934 ntBASIC20.93■□□□□ 0.94
NECTIN3Q9NQS3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NECTIN3Q9NQS3 AC135279.3-201ENST00000610945 1311 ntBASIC20.93■□□□□ 0.94
NECTIN3Q9NQS3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.93■□□□□ 0.94
NECTIN3Q9NQS3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NECTIN3Q9NQS3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.93■□□□□ 0.94
NECTIN3Q9NQS3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NECTIN3Q9NQS3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NECTIN3Q9NQS3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.93■□□□□ 0.94
NECTIN3Q9NQS3 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.92■□□□□ 0.94
NECTIN3Q9NQS3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.92■□□□□ 0.94
NECTIN3Q9NQS3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
NECTIN3Q9NQS3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NECTIN3Q9NQS3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
NECTIN3Q9NQS3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.92■□□□□ 0.94
NECTIN3Q9NQS3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms