Protein–RNA interactions for Protein: Q9HCC6

HES4, Transcription factor HES-4, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HES4Q9HCC6 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.57■□□□□ 0.56
HES4Q9HCC6 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HES4Q9HCC6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
HES4Q9HCC6 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
HES4Q9HCC6 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
HES4Q9HCC6 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HES4Q9HCC6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HES4Q9HCC6 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HES4Q9HCC6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.56■□□□□ 0.56
HES4Q9HCC6 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HES4Q9HCC6 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.56■□□□□ 0.56
HES4Q9HCC6 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.56■□□□□ 0.56
HES4Q9HCC6 MIR4466-201ENST00000606121 54 ntBASIC18.56■□□□□ 0.56
HES4Q9HCC6 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
HES4Q9HCC6 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
HES4Q9HCC6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HES4Q9HCC6 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.55■□□□□ 0.56
HES4Q9HCC6 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HES4Q9HCC6 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
HES4Q9HCC6 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.55■□□□□ 0.56
HES4Q9HCC6 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
HES4Q9HCC6 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.55■□□□□ 0.56
HES4Q9HCC6 AC092171.4-201ENST00000609130 632 ntBASIC18.55■□□□□ 0.56
HES4Q9HCC6 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.55■□□□□ 0.56
HES4Q9HCC6 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
HES4Q9HCC6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
HES4Q9HCC6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HES4Q9HCC6 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.55■□□□□ 0.56
HES4Q9HCC6 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.54■□□□□ 0.56
HES4Q9HCC6 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.54■□□□□ 0.56
HES4Q9HCC6 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
HES4Q9HCC6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
HES4Q9HCC6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.54■□□□□ 0.56
HES4Q9HCC6 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HES4Q9HCC6 AC131281.2-201ENST00000520478 145 ntBASIC18.54■□□□□ 0.56
HES4Q9HCC6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.54■□□□□ 0.56
HES4Q9HCC6 pRNA.6-201ENST00000610482 90 ntBASIC18.54■□□□□ 0.56
HES4Q9HCC6 pRNA.5-201ENST00000612139 90 ntBASIC18.54■□□□□ 0.56
HES4Q9HCC6 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.54■□□□□ 0.56
HES4Q9HCC6 pRNA.11-201ENST00000618423 90 ntBASIC18.54■□□□□ 0.56
HES4Q9HCC6 pRNA.13-201ENST00000619112 90 ntBASIC18.54■□□□□ 0.56
HES4Q9HCC6 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
HES4Q9HCC6 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HES4Q9HCC6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.54■□□□□ 0.56
HES4Q9HCC6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HES4Q9HCC6 LINC01960-201ENST00000563759 1884 ntBASIC18.54■□□□□ 0.56
HES4Q9HCC6 AC133637.1-201ENST00000624115 1537 ntBASIC18.54■□□□□ 0.56
HES4Q9HCC6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HES4Q9HCC6 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HES4Q9HCC6 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HES4Q9HCC6 ECEL1P1-201ENST00000373592 1742 ntBASIC18.53■□□□□ 0.56
HES4Q9HCC6 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
HES4Q9HCC6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.53■□□□□ 0.56
HES4Q9HCC6 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
HES4Q9HCC6 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HES4Q9HCC6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.53■□□□□ 0.56
HES4Q9HCC6 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.53■□□□□ 0.56
HES4Q9HCC6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HES4Q9HCC6 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.53■□□□□ 0.56
HES4Q9HCC6 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HES4Q9HCC6 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HES4Q9HCC6 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HES4Q9HCC6 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
HES4Q9HCC6 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.52■□□□□ 0.56
HES4Q9HCC6 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HES4Q9HCC6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
HES4Q9HCC6 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HES4Q9HCC6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HES4Q9HCC6 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
HES4Q9HCC6 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
HES4Q9HCC6 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
HES4Q9HCC6 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HES4Q9HCC6 AC242852.2-201ENST00000615738 1807 ntBASIC18.52■□□□□ 0.56
HES4Q9HCC6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HES4Q9HCC6 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
HES4Q9HCC6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.52■□□□□ 0.56
HES4Q9HCC6 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.52■□□□□ 0.56
HES4Q9HCC6 MIR3181-201ENST00000578512 73 ntBASIC18.52■□□□□ 0.56
HES4Q9HCC6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HES4Q9HCC6 AC079834.2-201ENST00000609776 1949 ntBASIC18.52■□□□□ 0.56
HES4Q9HCC6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HES4Q9HCC6 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HES4Q9HCC6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.52■□□□□ 0.55
HES4Q9HCC6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
HES4Q9HCC6 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HES4Q9HCC6 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HES4Q9HCC6 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HES4Q9HCC6 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.51■□□□□ 0.55
HES4Q9HCC6 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HES4Q9HCC6 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HES4Q9HCC6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.51■□□□□ 0.55
HES4Q9HCC6 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HES4Q9HCC6 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HES4Q9HCC6 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HES4Q9HCC6 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HES4Q9HCC6 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.51■□□□□ 0.55
HES4Q9HCC6 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.51■□□□□ 0.55
HES4Q9HCC6 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.51■□□□□ 0.55
HES4Q9HCC6 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.51■□□□□ 0.55
HES4Q9HCC6 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms