Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.73■■□□□ 1.39
RC3H2Q9HBD1 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC23.73■■□□□ 1.39
RC3H2Q9HBD1 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RC3H2Q9HBD1 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC23.73■■□□□ 1.39
RC3H2Q9HBD1 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RC3H2Q9HBD1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RC3H2Q9HBD1 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RC3H2Q9HBD1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RC3H2Q9HBD1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
RC3H2Q9HBD1 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RC3H2Q9HBD1 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RC3H2Q9HBD1 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
RC3H2Q9HBD1 KRT19P1-201ENST00000405746 1186 ntBASIC23.72■■□□□ 1.39
RC3H2Q9HBD1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23.72■■□□□ 1.39
RC3H2Q9HBD1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RC3H2Q9HBD1 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.72■■□□□ 1.39
RC3H2Q9HBD1 AC004687.1-201ENST00000579003 1625 ntBASIC23.72■■□□□ 1.39
RC3H2Q9HBD1 AC079630.1-202ENST00000618127 1840 ntBASIC23.72■■□□□ 1.39
RC3H2Q9HBD1 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.72■■□□□ 1.39
RC3H2Q9HBD1 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
RC3H2Q9HBD1 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.72■■□□□ 1.39
RC3H2Q9HBD1 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RC3H2Q9HBD1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RC3H2Q9HBD1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.71■■□□□ 1.39
RC3H2Q9HBD1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
RC3H2Q9HBD1 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RC3H2Q9HBD1 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RC3H2Q9HBD1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RC3H2Q9HBD1 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
RC3H2Q9HBD1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.71■■□□□ 1.39
RC3H2Q9HBD1 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC23.71■■□□□ 1.39
RC3H2Q9HBD1 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.71■■□□□ 1.39
RC3H2Q9HBD1 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC23.71■■□□□ 1.39
RC3H2Q9HBD1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC23.71■■□□□ 1.39
RC3H2Q9HBD1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.71■■□□□ 1.39
RC3H2Q9HBD1 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.71■■□□□ 1.39
RC3H2Q9HBD1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.7■■□□□ 1.39
RC3H2Q9HBD1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC23.7■■□□□ 1.38
RC3H2Q9HBD1 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.7■■□□□ 1.38
RC3H2Q9HBD1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RC3H2Q9HBD1 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC23.7■■□□□ 1.38
RC3H2Q9HBD1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC23.7■■□□□ 1.38
RC3H2Q9HBD1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RC3H2Q9HBD1 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RC3H2Q9HBD1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC23.69■■□□□ 1.38
RC3H2Q9HBD1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.69■■□□□ 1.38
RC3H2Q9HBD1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.69■■□□□ 1.38
RC3H2Q9HBD1 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC23.69■■□□□ 1.38
RC3H2Q9HBD1 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RC3H2Q9HBD1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.69■■□□□ 1.38
RC3H2Q9HBD1 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RC3H2Q9HBD1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
RC3H2Q9HBD1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RC3H2Q9HBD1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RC3H2Q9HBD1 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RC3H2Q9HBD1 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
RC3H2Q9HBD1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RC3H2Q9HBD1 AC010141.3-201ENST00000456659 717 ntBASIC23.68■■□□□ 1.38
RC3H2Q9HBD1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.68■■□□□ 1.38
RC3H2Q9HBD1 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.67■■□□□ 1.38
RC3H2Q9HBD1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RC3H2Q9HBD1 NCF1B-203ENST00000435988 1254 ntBASIC23.67■■□□□ 1.38
RC3H2Q9HBD1 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.67■■□□□ 1.38
RC3H2Q9HBD1 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.67■■□□□ 1.38
RC3H2Q9HBD1 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RC3H2Q9HBD1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RC3H2Q9HBD1 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RC3H2Q9HBD1 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RC3H2Q9HBD1 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
RC3H2Q9HBD1 AC006970.2-201ENST00000450065 779 ntBASIC23.66■■□□□ 1.38
RC3H2Q9HBD1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RC3H2Q9HBD1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RC3H2Q9HBD1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RC3H2Q9HBD1 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RC3H2Q9HBD1 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RC3H2Q9HBD1 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RC3H2Q9HBD1 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RC3H2Q9HBD1 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RC3H2Q9HBD1 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
RC3H2Q9HBD1 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
RC3H2Q9HBD1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
RC3H2Q9HBD1 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RC3H2Q9HBD1 ABHD17AP1-201ENST00000358206 933 ntBASIC23.65■■□□□ 1.38
RC3H2Q9HBD1 METTL26-203ENST00000397664 604 ntTSL 2 BASIC23.65■■□□□ 1.38
RC3H2Q9HBD1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC23.65■■□□□ 1.38
RC3H2Q9HBD1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC23.65■■□□□ 1.38
RC3H2Q9HBD1 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC23.65■■□□□ 1.38
RC3H2Q9HBD1 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RC3H2Q9HBD1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.65■■□□□ 1.38
RC3H2Q9HBD1 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
RC3H2Q9HBD1 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.64■■□□□ 1.38
RC3H2Q9HBD1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
RC3H2Q9HBD1 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
RC3H2Q9HBD1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.37
RC3H2Q9HBD1 KRT18P11-201ENST00000435214 1283 ntBASIC23.64■■□□□ 1.37
RC3H2Q9HBD1 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RC3H2Q9HBD1 AC011767.1-201ENST00000617410 1153 ntBASIC23.64■■□□□ 1.37
RC3H2Q9HBD1 AL109923.1-201ENST00000618799 583 ntBASIC23.64■■□□□ 1.37
RC3H2Q9HBD1 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.64■■□□□ 1.37
RC3H2Q9HBD1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms