Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.39■■□□□ 1.17
CDC42EP4Q9H3Q1 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.39■■□□□ 1.17
CDC42EP4Q9H3Q1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC22.39■■□□□ 1.17
CDC42EP4Q9H3Q1 LINC01529-204ENST00000636474 1715 ntBASIC22.39■■□□□ 1.17
CDC42EP4Q9H3Q1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
CDC42EP4Q9H3Q1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.17
CDC42EP4Q9H3Q1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC22.38■■□□□ 1.17
CDC42EP4Q9H3Q1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDC42EP4Q9H3Q1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDC42EP4Q9H3Q1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.38■■□□□ 1.17
CDC42EP4Q9H3Q1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC22.38■■□□□ 1.17
CDC42EP4Q9H3Q1 AC074183.2-201ENST00000623112 922 ntBASIC22.38■■□□□ 1.17
CDC42EP4Q9H3Q1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.38■■□□□ 1.17
CDC42EP4Q9H3Q1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDC42EP4Q9H3Q1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
CDC42EP4Q9H3Q1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
CDC42EP4Q9H3Q1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDC42EP4Q9H3Q1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.37■■□□□ 1.17
CDC42EP4Q9H3Q1 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC22.37■■□□□ 1.17
CDC42EP4Q9H3Q1 NTF6A-201ENST00000591175 560 ntBASIC22.37■■□□□ 1.17
CDC42EP4Q9H3Q1 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDC42EP4Q9H3Q1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
CDC42EP4Q9H3Q1 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CDC42EP4Q9H3Q1 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
CDC42EP4Q9H3Q1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CDC42EP4Q9H3Q1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.36■■□□□ 1.17
CDC42EP4Q9H3Q1 AC010980.1-201ENST00000587192 1142 ntBASIC22.36■■□□□ 1.17
CDC42EP4Q9H3Q1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC22.36■■□□□ 1.17
CDC42EP4Q9H3Q1 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.36■■□□□ 1.17
CDC42EP4Q9H3Q1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDC42EP4Q9H3Q1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
CDC42EP4Q9H3Q1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.35■■□□□ 1.17
CDC42EP4Q9H3Q1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.35■■□□□ 1.17
CDC42EP4Q9H3Q1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDC42EP4Q9H3Q1 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC22.35■■□□□ 1.17
CDC42EP4Q9H3Q1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC22.35■■□□□ 1.17
CDC42EP4Q9H3Q1 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC22.35■■□□□ 1.17
CDC42EP4Q9H3Q1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC22.35■■□□□ 1.17
CDC42EP4Q9H3Q1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.35■■□□□ 1.17
CDC42EP4Q9H3Q1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC22.35■■□□□ 1.17
CDC42EP4Q9H3Q1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
CDC42EP4Q9H3Q1 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
CDC42EP4Q9H3Q1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.34■■□□□ 1.17
CDC42EP4Q9H3Q1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDC42EP4Q9H3Q1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.34■■□□□ 1.17
CDC42EP4Q9H3Q1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDC42EP4Q9H3Q1 AC004987.1-201ENST00000428627 508 ntBASIC22.34■■□□□ 1.17
CDC42EP4Q9H3Q1 ABHD17AP5-201ENST00000580133 923 ntBASIC22.34■■□□□ 1.17
CDC42EP4Q9H3Q1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.34■■□□□ 1.17
CDC42EP4Q9H3Q1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
CDC42EP4Q9H3Q1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDC42EP4Q9H3Q1 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDC42EP4Q9H3Q1 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CDC42EP4Q9H3Q1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
CDC42EP4Q9H3Q1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
CDC42EP4Q9H3Q1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CDC42EP4Q9H3Q1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.33■■□□□ 1.17
CDC42EP4Q9H3Q1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
CDC42EP4Q9H3Q1 ATP5G2P3-201ENST00000429083 425 ntBASIC22.33■■□□□ 1.17
CDC42EP4Q9H3Q1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.33■■□□□ 1.17
CDC42EP4Q9H3Q1 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CDC42EP4Q9H3Q1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
CDC42EP4Q9H3Q1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
CDC42EP4Q9H3Q1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CDC42EP4Q9H3Q1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.32■■□□□ 1.16
CDC42EP4Q9H3Q1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
CDC42EP4Q9H3Q1 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDC42EP4Q9H3Q1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
CDC42EP4Q9H3Q1 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDC42EP4Q9H3Q1 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
CDC42EP4Q9H3Q1 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
CDC42EP4Q9H3Q1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDC42EP4Q9H3Q1 AC005229.4-201ENST00000610085 2198 ntBASIC22.32■■□□□ 1.16
CDC42EP4Q9H3Q1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDC42EP4Q9H3Q1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDC42EP4Q9H3Q1 FP325331.1-202ENST00000623531 1380 ntBASIC22.31■■□□□ 1.16
CDC42EP4Q9H3Q1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.31■■□□□ 1.16
CDC42EP4Q9H3Q1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC22.31■■□□□ 1.16
CDC42EP4Q9H3Q1 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDC42EP4Q9H3Q1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.31■■□□□ 1.16
CDC42EP4Q9H3Q1 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDC42EP4Q9H3Q1 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDC42EP4Q9H3Q1 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDC42EP4Q9H3Q1 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDC42EP4Q9H3Q1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC22.31■■□□□ 1.16
CDC42EP4Q9H3Q1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
CDC42EP4Q9H3Q1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.31■■□□□ 1.16
CDC42EP4Q9H3Q1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDC42EP4Q9H3Q1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CDC42EP4Q9H3Q1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDC42EP4Q9H3Q1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDC42EP4Q9H3Q1 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDC42EP4Q9H3Q1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDC42EP4Q9H3Q1 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC22.3■■□□□ 1.16
CDC42EP4Q9H3Q1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDC42EP4Q9H3Q1 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDC42EP4Q9H3Q1 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC22.3■■□□□ 1.16
CDC42EP4Q9H3Q1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDC42EP4Q9H3Q1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDC42EP4Q9H3Q1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms