Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
DDX47Q9H0S4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.89■■□□□ 1.25
DDX47Q9H0S4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
DDX47Q9H0S4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
DDX47Q9H0S4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
DDX47Q9H0S4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.89■■□□□ 1.25
DDX47Q9H0S4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.89■■□□□ 1.25
DDX47Q9H0S4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
DDX47Q9H0S4 LINC01529-204ENST00000636474 1715 ntBASIC22.88■■□□□ 1.25
DDX47Q9H0S4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC22.88■■□□□ 1.25
DDX47Q9H0S4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.88■■□□□ 1.25
DDX47Q9H0S4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
DDX47Q9H0S4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
DDX47Q9H0S4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
DDX47Q9H0S4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
DDX47Q9H0S4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC22.87■■□□□ 1.25
DDX47Q9H0S4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
DDX47Q9H0S4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.87■■□□□ 1.25
DDX47Q9H0S4 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.87■■□□□ 1.25
DDX47Q9H0S4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
DDX47Q9H0S4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
DDX47Q9H0S4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
DDX47Q9H0S4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
DDX47Q9H0S4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
DDX47Q9H0S4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC22.86■■□□□ 1.25
DDX47Q9H0S4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
DDX47Q9H0S4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC22.86■■□□□ 1.25
DDX47Q9H0S4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
DDX47Q9H0S4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
DDX47Q9H0S4 LINC01960-201ENST00000563759 1884 ntBASIC22.86■■□□□ 1.25
DDX47Q9H0S4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC22.86■■□□□ 1.25
DDX47Q9H0S4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
DDX47Q9H0S4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC22.86■■□□□ 1.25
DDX47Q9H0S4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
DDX47Q9H0S4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
DDX47Q9H0S4 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
DDX47Q9H0S4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.86■■□□□ 1.25
DDX47Q9H0S4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
DDX47Q9H0S4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX47Q9H0S4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX47Q9H0S4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC22.85■■□□□ 1.25
DDX47Q9H0S4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
DDX47Q9H0S4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX47Q9H0S4 MIR4508-201ENST00000584178 70 ntBASIC22.85■■□□□ 1.25
DDX47Q9H0S4 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
DDX47Q9H0S4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX47Q9H0S4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX47Q9H0S4 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
DDX47Q9H0S4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX47Q9H0S4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
DDX47Q9H0S4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
DDX47Q9H0S4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
DDX47Q9H0S4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
DDX47Q9H0S4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC22.84■■□□□ 1.25
DDX47Q9H0S4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
DDX47Q9H0S4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.84■■□□□ 1.25
DDX47Q9H0S4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.84■■□□□ 1.25
DDX47Q9H0S4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC22.84■■□□□ 1.25
DDX47Q9H0S4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.84■■□□□ 1.25
DDX47Q9H0S4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
DDX47Q9H0S4 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
DDX47Q9H0S4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
DDX47Q9H0S4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
DDX47Q9H0S4 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
DDX47Q9H0S4 PKD1P6-201ENST00000343738 4769 ntBASIC22.83■■□□□ 1.25
DDX47Q9H0S4 TSPY13P-201ENST00000338964 914 ntBASIC22.83■■□□□ 1.25
DDX47Q9H0S4 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.25
DDX47Q9H0S4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC22.83■■□□□ 1.25
DDX47Q9H0S4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC22.83■■□□□ 1.24
DDX47Q9H0S4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
DDX47Q9H0S4 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.83■■□□□ 1.24
DDX47Q9H0S4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
DDX47Q9H0S4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
DDX47Q9H0S4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
DDX47Q9H0S4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
DDX47Q9H0S4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
DDX47Q9H0S4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.82■■□□□ 1.24
DDX47Q9H0S4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
DDX47Q9H0S4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.82■■□□□ 1.24
DDX47Q9H0S4 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.82■■□□□ 1.24
DDX47Q9H0S4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
DDX47Q9H0S4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.81■■□□□ 1.24
DDX47Q9H0S4 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
DDX47Q9H0S4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
DDX47Q9H0S4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.81■■□□□ 1.24
DDX47Q9H0S4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.81■■□□□ 1.24
DDX47Q9H0S4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.81■■□□□ 1.24
DDX47Q9H0S4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
DDX47Q9H0S4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.81■■□□□ 1.24
DDX47Q9H0S4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC22.81■■□□□ 1.24
DDX47Q9H0S4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
DDX47Q9H0S4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC22.8■■□□□ 1.24
DDX47Q9H0S4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.8■■□□□ 1.24
DDX47Q9H0S4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
DDX47Q9H0S4 FP325331.1-202ENST00000623531 1380 ntBASIC22.8■■□□□ 1.24
DDX47Q9H0S4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
DDX47Q9H0S4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
DDX47Q9H0S4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
DDX47Q9H0S4 GUK1-208ENST00000366728 842 ntTSL 2 BASIC22.8■■□□□ 1.24
DDX47Q9H0S4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms