Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 EP400NL-214ENST00000641289 2402 ntBASIC20.17■□□□□ 0.82
TRIM2Q9C040 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM2Q9C040 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
TRIM2Q9C040 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM2Q9C040 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM2Q9C040 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM2Q9C040 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
TRIM2Q9C040 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
TRIM2Q9C040 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM2Q9C040 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.17■□□□□ 0.82
TRIM2Q9C040 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
TRIM2Q9C040 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM2Q9C040 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.16■□□□□ 0.82
TRIM2Q9C040 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM2Q9C040 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM2Q9C040 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM2Q9C040 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM2Q9C040 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
TRIM2Q9C040 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM2Q9C040 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM2Q9C040 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
TRIM2Q9C040 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.16■□□□□ 0.82
TRIM2Q9C040 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.16■□□□□ 0.82
TRIM2Q9C040 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM2Q9C040 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM2Q9C040 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TRIM2Q9C040 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM2Q9C040 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM2Q9C040 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.16■□□□□ 0.82
TRIM2Q9C040 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TRIM2Q9C040 AC087742.1-201ENST00000575880 1738 ntBASIC20.16■□□□□ 0.82
TRIM2Q9C040 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM2Q9C040 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.15■□□□□ 0.82
TRIM2Q9C040 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM2Q9C040 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
TRIM2Q9C040 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.15■□□□□ 0.82
TRIM2Q9C040 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.15■□□□□ 0.82
TRIM2Q9C040 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.15■□□□□ 0.82
TRIM2Q9C040 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.15■□□□□ 0.82
TRIM2Q9C040 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM2Q9C040 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.15■□□□□ 0.82
TRIM2Q9C040 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM2Q9C040 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM2Q9C040 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM2Q9C040 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.15■□□□□ 0.82
TRIM2Q9C040 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM2Q9C040 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TRIM2Q9C040 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM2Q9C040 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM2Q9C040 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM2Q9C040 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM2Q9C040 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.14■□□□□ 0.81
TRIM2Q9C040 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM2Q9C040 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.14■□□□□ 0.81
TRIM2Q9C040 AC241377.3-202ENST00000626088 1088 ntBASIC20.14■□□□□ 0.81
TRIM2Q9C040 AC241585.3-202ENST00000628937 1088 ntBASIC20.14■□□□□ 0.81
TRIM2Q9C040 AC245100.8-202ENST00000629247 1058 ntBASIC20.14■□□□□ 0.81
TRIM2Q9C040 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TRIM2Q9C040 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM2Q9C040 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM2Q9C040 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM2Q9C040 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM2Q9C040 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM2Q9C040 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.13■□□□□ 0.81
TRIM2Q9C040 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.13■□□□□ 0.81
TRIM2Q9C040 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM2Q9C040 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
TRIM2Q9C040 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
TRIM2Q9C040 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM2Q9C040 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM2Q9C040 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM2Q9C040 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM2Q9C040 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM2Q9C040 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.12■□□□□ 0.81
TRIM2Q9C040 LINC01960-201ENST00000563759 1884 ntBASIC20.12■□□□□ 0.81
TRIM2Q9C040 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
TRIM2Q9C040 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM2Q9C040 AL356740.2-201ENST00000601559 647 ntBASIC20.12■□□□□ 0.81
TRIM2Q9C040 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.12■□□□□ 0.81
TRIM2Q9C040 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM2Q9C040 AC004687.1-201ENST00000579003 1625 ntBASIC20.12■□□□□ 0.81
TRIM2Q9C040 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM2Q9C040 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM2Q9C040 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM2Q9C040 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM2Q9C040 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
TRIM2Q9C040 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM2Q9C040 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.11■□□□□ 0.81
TRIM2Q9C040 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.11■□□□□ 0.81
TRIM2Q9C040 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM2Q9C040 AL499627.2-201ENST00000606283 725 ntBASIC20.11■□□□□ 0.81
TRIM2Q9C040 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM2Q9C040 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM2Q9C040 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.11■□□□□ 0.81
TRIM2Q9C040 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM2Q9C040 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
TRIM2Q9C040 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM2Q9C040 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM2Q9C040 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM2Q9C040 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms