Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.06■□□□□ 0.96
CNTNAP3Q9BZ76 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.06■□□□□ 0.96
CNTNAP3Q9BZ76 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CNTNAP3Q9BZ76 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNTNAP3Q9BZ76 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.05■□□□□ 0.96
CNTNAP3Q9BZ76 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CNTNAP3Q9BZ76 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNTNAP3Q9BZ76 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNTNAP3Q9BZ76 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.05■□□□□ 0.96
CNTNAP3Q9BZ76 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
CNTNAP3Q9BZ76 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.05■□□□□ 0.96
CNTNAP3Q9BZ76 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.05■□□□□ 0.96
CNTNAP3Q9BZ76 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.05■□□□□ 0.96
CNTNAP3Q9BZ76 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.05■□□□□ 0.96
CNTNAP3Q9BZ76 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNTNAP3Q9BZ76 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.05■□□□□ 0.96
CNTNAP3Q9BZ76 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
CNTNAP3Q9BZ76 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CNTNAP3Q9BZ76 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.05■□□□□ 0.96
CNTNAP3Q9BZ76 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CNTNAP3Q9BZ76 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNTNAP3Q9BZ76 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNTNAP3Q9BZ76 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.04■□□□□ 0.96
CNTNAP3Q9BZ76 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CNTNAP3Q9BZ76 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNTNAP3Q9BZ76 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.04■□□□□ 0.96
CNTNAP3Q9BZ76 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNTNAP3Q9BZ76 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CNTNAP3Q9BZ76 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
CNTNAP3Q9BZ76 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.03■□□□□ 0.96
CNTNAP3Q9BZ76 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.03■□□□□ 0.96
CNTNAP3Q9BZ76 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.03■□□□□ 0.96
CNTNAP3Q9BZ76 AC133552.2-202ENST00000575694 574 ntBASIC21.03■□□□□ 0.96
CNTNAP3Q9BZ76 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.03■□□□□ 0.96
CNTNAP3Q9BZ76 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
CNTNAP3Q9BZ76 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CNTNAP3Q9BZ76 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.03■□□□□ 0.96
CNTNAP3Q9BZ76 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CNTNAP3Q9BZ76 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CNTNAP3Q9BZ76 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNTNAP3Q9BZ76 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.03■□□□□ 0.96
CNTNAP3Q9BZ76 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CNTNAP3Q9BZ76 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNTNAP3Q9BZ76 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.02■□□□□ 0.96
CNTNAP3Q9BZ76 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CNTNAP3Q9BZ76 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.02■□□□□ 0.96
CNTNAP3Q9BZ76 MIR4497-201ENST00000583208 89 ntBASIC21.02■□□□□ 0.96
CNTNAP3Q9BZ76 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.02■□□□□ 0.96
CNTNAP3Q9BZ76 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.02■□□□□ 0.96
CNTNAP3Q9BZ76 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CNTNAP3Q9BZ76 AC141586.4-201ENST00000624558 1573 ntBASIC21.02■□□□□ 0.95
CNTNAP3Q9BZ76 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
CNTNAP3Q9BZ76 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CNTNAP3Q9BZ76 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CNTNAP3Q9BZ76 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.01■□□□□ 0.95
CNTNAP3Q9BZ76 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.01■□□□□ 0.95
CNTNAP3Q9BZ76 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.01■□□□□ 0.95
CNTNAP3Q9BZ76 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNTNAP3Q9BZ76 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.01■□□□□ 0.95
CNTNAP3Q9BZ76 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.01■□□□□ 0.95
CNTNAP3Q9BZ76 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.01■□□□□ 0.95
CNTNAP3Q9BZ76 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CNTNAP3Q9BZ76 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.01■□□□□ 0.95
CNTNAP3Q9BZ76 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.01■□□□□ 0.95
CNTNAP3Q9BZ76 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CNTNAP3Q9BZ76 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.01■□□□□ 0.95
CNTNAP3Q9BZ76 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNTNAP3Q9BZ76 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNTNAP3Q9BZ76 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNTNAP3Q9BZ76 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNTNAP3Q9BZ76 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNTNAP3Q9BZ76 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21■□□□□ 0.95
CNTNAP3Q9BZ76 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CNTNAP3Q9BZ76 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNTNAP3Q9BZ76 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CNTNAP3Q9BZ76 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21■□□□□ 0.95
CNTNAP3Q9BZ76 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21■□□□□ 0.95
CNTNAP3Q9BZ76 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21■□□□□ 0.95
CNTNAP3Q9BZ76 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CNTNAP3Q9BZ76 AL445228.2-201ENST00000605589 952 ntBASIC21■□□□□ 0.95
CNTNAP3Q9BZ76 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21■□□□□ 0.95
CNTNAP3Q9BZ76 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNTNAP3Q9BZ76 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21■□□□□ 0.95
CNTNAP3Q9BZ76 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21■□□□□ 0.95
CNTNAP3Q9BZ76 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CNTNAP3Q9BZ76 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNTNAP3Q9BZ76 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.99■□□□□ 0.95
CNTNAP3Q9BZ76 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CNTNAP3Q9BZ76 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.99■□□□□ 0.95
CNTNAP3Q9BZ76 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.99■□□□□ 0.95
CNTNAP3Q9BZ76 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.99■□□□□ 0.95
CNTNAP3Q9BZ76 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.99■□□□□ 0.95
CNTNAP3Q9BZ76 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
CNTNAP3Q9BZ76 LINC01003-201ENST00000564834 1764 ntBASIC20.98■□□□□ 0.95
CNTNAP3Q9BZ76 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CNTNAP3Q9BZ76 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CNTNAP3Q9BZ76 OR2I1P-207ENST00000453522 948 ntBASIC20.98■□□□□ 0.95
CNTNAP3Q9BZ76 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CNTNAP3Q9BZ76 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CNTNAP3Q9BZ76 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms