Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.1■□□□□ 0.81
COPS4Q9BT78 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.1■□□□□ 0.81
COPS4Q9BT78 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COPS4Q9BT78 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COPS4Q9BT78 AC010980.1-201ENST00000587192 1142 ntBASIC20.1■□□□□ 0.81
COPS4Q9BT78 AC012354.3-201ENST00000623734 483 ntBASIC20.1■□□□□ 0.81
COPS4Q9BT78 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COPS4Q9BT78 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
COPS4Q9BT78 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COPS4Q9BT78 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COPS4Q9BT78 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COPS4Q9BT78 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.1■□□□□ 0.81
COPS4Q9BT78 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COPS4Q9BT78 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COPS4Q9BT78 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
COPS4Q9BT78 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COPS4Q9BT78 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COPS4Q9BT78 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.09■□□□□ 0.81
COPS4Q9BT78 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
COPS4Q9BT78 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.09■□□□□ 0.81
COPS4Q9BT78 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.09■□□□□ 0.81
COPS4Q9BT78 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.09■□□□□ 0.81
COPS4Q9BT78 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.09■□□□□ 0.81
COPS4Q9BT78 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
COPS4Q9BT78 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.09■□□□□ 0.81
COPS4Q9BT78 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
COPS4Q9BT78 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COPS4Q9BT78 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COPS4Q9BT78 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
COPS4Q9BT78 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COPS4Q9BT78 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COPS4Q9BT78 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COPS4Q9BT78 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
COPS4Q9BT78 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.08■□□□□ 0.81
COPS4Q9BT78 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COPS4Q9BT78 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.08■□□□□ 0.81
COPS4Q9BT78 AC120024.1-201ENST00000562672 995 ntBASIC20.08■□□□□ 0.81
COPS4Q9BT78 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
COPS4Q9BT78 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
COPS4Q9BT78 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COPS4Q9BT78 AL353803.4-201ENST00000565882 1934 ntBASIC20.08■□□□□ 0.8
COPS4Q9BT78 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
COPS4Q9BT78 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
COPS4Q9BT78 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.07■□□□□ 0.8
COPS4Q9BT78 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
COPS4Q9BT78 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
COPS4Q9BT78 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.07■□□□□ 0.8
COPS4Q9BT78 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.07■□□□□ 0.8
COPS4Q9BT78 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COPS4Q9BT78 THA1P-201ENST00000590384 1145 ntBASIC20.07■□□□□ 0.8
COPS4Q9BT78 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
COPS4Q9BT78 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
COPS4Q9BT78 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.07■□□□□ 0.8
COPS4Q9BT78 FAM99A-202ENST00000538190 1989 ntBASIC20.06■□□□□ 0.8
COPS4Q9BT78 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COPS4Q9BT78 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
COPS4Q9BT78 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
COPS4Q9BT78 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.06■□□□□ 0.8
COPS4Q9BT78 PVT1_1.1-201ENST00000615125 194 ntBASIC20.06■□□□□ 0.8
COPS4Q9BT78 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COPS4Q9BT78 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
COPS4Q9BT78 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.06■□□□□ 0.8
COPS4Q9BT78 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COPS4Q9BT78 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COPS4Q9BT78 AC087742.1-201ENST00000575880 1738 ntBASIC20.05■□□□□ 0.8
COPS4Q9BT78 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COPS4Q9BT78 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COPS4Q9BT78 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COPS4Q9BT78 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.05■□□□□ 0.8
COPS4Q9BT78 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.05■□□□□ 0.8
COPS4Q9BT78 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.05■□□□□ 0.8
COPS4Q9BT78 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
COPS4Q9BT78 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.05■□□□□ 0.8
COPS4Q9BT78 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COPS4Q9BT78 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
COPS4Q9BT78 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
COPS4Q9BT78 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.04■□□□□ 0.8
COPS4Q9BT78 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COPS4Q9BT78 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
COPS4Q9BT78 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.04■□□□□ 0.8
COPS4Q9BT78 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COPS4Q9BT78 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.04■□□□□ 0.8
COPS4Q9BT78 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.04■□□□□ 0.8
COPS4Q9BT78 AL033527.3-201ENST00000566366 1196 ntBASIC20.04■□□□□ 0.8
COPS4Q9BT78 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
COPS4Q9BT78 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COPS4Q9BT78 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
COPS4Q9BT78 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COPS4Q9BT78 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.04■□□□□ 0.8
COPS4Q9BT78 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COPS4Q9BT78 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.04■□□□□ 0.8
COPS4Q9BT78 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
COPS4Q9BT78 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
COPS4Q9BT78 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COPS4Q9BT78 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
COPS4Q9BT78 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.03■□□□□ 0.8
COPS4Q9BT78 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.03■□□□□ 0.8
COPS4Q9BT78 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.03■□□□□ 0.8
COPS4Q9BT78 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
COPS4Q9BT78 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms