Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
CCM2Q9BSQ5 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCM2Q9BSQ5 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCM2Q9BSQ5 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCM2Q9BSQ5 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCM2Q9BSQ5 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCM2Q9BSQ5 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.64■■□□□ 1.05
CCM2Q9BSQ5 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CCM2Q9BSQ5 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CCM2Q9BSQ5 BX842568.3-201ENST00000418104 571 ntBASIC21.64■■□□□ 1.05
CCM2Q9BSQ5 SLC47A1P1-202ENST00000449666 945 ntBASIC21.64■■□□□ 1.05
CCM2Q9BSQ5 AC010525.1-201ENST00000585559 441 ntBASIC21.64■■□□□ 1.05
CCM2Q9BSQ5 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.64■■□□□ 1.05
CCM2Q9BSQ5 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCM2Q9BSQ5 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCM2Q9BSQ5 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CCM2Q9BSQ5 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCM2Q9BSQ5 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
CCM2Q9BSQ5 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCM2Q9BSQ5 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.64■■□□□ 1.05
CCM2Q9BSQ5 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCM2Q9BSQ5 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCM2Q9BSQ5 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCM2Q9BSQ5 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCM2Q9BSQ5 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CCM2Q9BSQ5 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.63■■□□□ 1.05
CCM2Q9BSQ5 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.63■■□□□ 1.05
CCM2Q9BSQ5 AL031432.3-201ENST00000607698 485 ntBASIC21.63■■□□□ 1.05
CCM2Q9BSQ5 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CCM2Q9BSQ5 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CCM2Q9BSQ5 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCM2Q9BSQ5 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCM2Q9BSQ5 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CCM2Q9BSQ5 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCM2Q9BSQ5 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.62■■□□□ 1.05
CCM2Q9BSQ5 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.62■■□□□ 1.05
CCM2Q9BSQ5 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CCM2Q9BSQ5 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.62■■□□□ 1.05
CCM2Q9BSQ5 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCM2Q9BSQ5 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCM2Q9BSQ5 SUDS3P1-201ENST00000505831 966 ntBASIC21.62■■□□□ 1.05
CCM2Q9BSQ5 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.62■■□□□ 1.05
CCM2Q9BSQ5 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CCM2Q9BSQ5 AC142381.2-201ENST00000566120 298 ntBASIC21.62■■□□□ 1.05
CCM2Q9BSQ5 AC233992.3-201ENST00000607491 485 ntBASIC21.62■■□□□ 1.05
CCM2Q9BSQ5 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCM2Q9BSQ5 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.62■■□□□ 1.05
CCM2Q9BSQ5 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCM2Q9BSQ5 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.62■■□□□ 1.05
CCM2Q9BSQ5 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCM2Q9BSQ5 AC068473.5-201ENST00000616428 2072 ntBASIC21.62■■□□□ 1.05
CCM2Q9BSQ5 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.62■■□□□ 1.05
CCM2Q9BSQ5 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCM2Q9BSQ5 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CCM2Q9BSQ5 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CCM2Q9BSQ5 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.61■■□□□ 1.05
CCM2Q9BSQ5 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCM2Q9BSQ5 AP001330.3-201ENST00000520123 633 ntBASIC21.61■■□□□ 1.05
CCM2Q9BSQ5 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.61■■□□□ 1.05
CCM2Q9BSQ5 AC027682.1-201ENST00000562846 899 ntBASIC21.61■■□□□ 1.05
CCM2Q9BSQ5 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCM2Q9BSQ5 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCM2Q9BSQ5 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CCM2Q9BSQ5 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CCM2Q9BSQ5 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCM2Q9BSQ5 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCM2Q9BSQ5 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.6■■□□□ 1.05
CCM2Q9BSQ5 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.6■■□□□ 1.05
CCM2Q9BSQ5 MIR939-201ENST00000401314 82 ntBASIC21.6■■□□□ 1.05
CCM2Q9BSQ5 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCM2Q9BSQ5 AC008764.7-201ENST00000593779 1081 ntBASIC21.6■■□□□ 1.05
CCM2Q9BSQ5 AL136967.2-201ENST00000623968 743 ntBASIC21.6■■□□□ 1.05
CCM2Q9BSQ5 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CCM2Q9BSQ5 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCM2Q9BSQ5 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCM2Q9BSQ5 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCM2Q9BSQ5 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.59■■□□□ 1.05
CCM2Q9BSQ5 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCM2Q9BSQ5 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCM2Q9BSQ5 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.59■■□□□ 1.05
CCM2Q9BSQ5 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CCM2Q9BSQ5 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCM2Q9BSQ5 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCM2Q9BSQ5 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCM2Q9BSQ5 AC091305.1-201ENST00000479476 895 ntBASIC21.59■■□□□ 1.05
CCM2Q9BSQ5 AF213884.3-201ENST00000563833 479 ntBASIC21.59■■□□□ 1.05
CCM2Q9BSQ5 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCM2Q9BSQ5 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCM2Q9BSQ5 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCM2Q9BSQ5 LINC01960-201ENST00000563759 1884 ntBASIC21.58■■□□□ 1.05
CCM2Q9BSQ5 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.58■■□□□ 1.05
CCM2Q9BSQ5 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCM2Q9BSQ5 AL031602.1-201ENST00000633169 911 ntBASIC21.58■■□□□ 1.05
CCM2Q9BSQ5 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCM2Q9BSQ5 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CCM2Q9BSQ5 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CCM2Q9BSQ5 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
CCM2Q9BSQ5 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCM2Q9BSQ5 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.58■■□□□ 1.04
CCM2Q9BSQ5 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms