Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP1S3Q96PC3 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
AP1S3Q96PC3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP1S3Q96PC3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP1S3Q96PC3 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP1S3Q96PC3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC16.54■□□□□ 0.24
AP1S3Q96PC3 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP1S3Q96PC3 EP400NL-214ENST00000641289 2402 ntBASIC16.54■□□□□ 0.24
AP1S3Q96PC3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP1S3Q96PC3 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP1S3Q96PC3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC16.53■□□□□ 0.24
AP1S3Q96PC3 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP1S3Q96PC3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP1S3Q96PC3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC16.53■□□□□ 0.24
AP1S3Q96PC3 AC137767.1-201ENST00000602918 1920 ntBASIC16.53■□□□□ 0.24
AP1S3Q96PC3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
AP1S3Q96PC3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP1S3Q96PC3 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP1S3Q96PC3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC16.53■□□□□ 0.24
AP1S3Q96PC3 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP1S3Q96PC3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP1S3Q96PC3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC16.53■□□□□ 0.24
AP1S3Q96PC3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC16.53■□□□□ 0.24
AP1S3Q96PC3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP1S3Q96PC3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
AP1S3Q96PC3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP1S3Q96PC3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
AP1S3Q96PC3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP1S3Q96PC3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP1S3Q96PC3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP1S3Q96PC3 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC16.53■□□□□ 0.24
AP1S3Q96PC3 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
AP1S3Q96PC3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
AP1S3Q96PC3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
AP1S3Q96PC3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP1S3Q96PC3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
AP1S3Q96PC3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP1S3Q96PC3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP1S3Q96PC3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC16.52■□□□□ 0.24
AP1S3Q96PC3 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC16.52■□□□□ 0.24
AP1S3Q96PC3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC16.52■□□□□ 0.24
AP1S3Q96PC3 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
AP1S3Q96PC3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
AP1S3Q96PC3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
AP1S3Q96PC3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
AP1S3Q96PC3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
AP1S3Q96PC3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
AP1S3Q96PC3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
AP1S3Q96PC3 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC16.51■□□□□ 0.23
AP1S3Q96PC3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP1S3Q96PC3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC16.51■□□□□ 0.23
AP1S3Q96PC3 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
AP1S3Q96PC3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP1S3Q96PC3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP1S3Q96PC3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP1S3Q96PC3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
AP1S3Q96PC3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC16.51■□□□□ 0.23
AP1S3Q96PC3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
AP1S3Q96PC3 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
AP1S3Q96PC3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP1S3Q96PC3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP1S3Q96PC3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
AP1S3Q96PC3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP1S3Q96PC3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP1S3Q96PC3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP1S3Q96PC3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S3Q96PC3 EI24-213ENST00000618552 1747 ntTSL 5 BASIC16.5■□□□□ 0.23
AP1S3Q96PC3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S3Q96PC3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S3Q96PC3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S3Q96PC3 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S3Q96PC3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S3Q96PC3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.5■□□□□ 0.23
AP1S3Q96PC3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
AP1S3Q96PC3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
AP1S3Q96PC3 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
AP1S3Q96PC3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC16.5■□□□□ 0.23
AP1S3Q96PC3 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S3Q96PC3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S3Q96PC3 MIR7108-201ENST00000614319 87 ntBASIC16.5■□□□□ 0.23
AP1S3Q96PC3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC16.5■□□□□ 0.23
AP1S3Q96PC3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S3Q96PC3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.5■□□□□ 0.23
AP1S3Q96PC3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
AP1S3Q96PC3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S3Q96PC3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC16.5■□□□□ 0.23
AP1S3Q96PC3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP1S3Q96PC3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC16.49■□□□□ 0.23
AP1S3Q96PC3 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP1S3Q96PC3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP1S3Q96PC3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP1S3Q96PC3 AL592295.1-201ENST00000400984 884 ntBASIC16.49■□□□□ 0.23
AP1S3Q96PC3 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC16.49■□□□□ 0.23
AP1S3Q96PC3 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
AP1S3Q96PC3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
AP1S3Q96PC3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
AP1S3Q96PC3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
AP1S3Q96PC3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.49■□□□□ 0.23
AP1S3Q96PC3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
AP1S3Q96PC3 AL022069.1-201ENST00000568025 1636 ntBASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms