Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC26.03■■□□□ 1.76
DDX11Q96FC9 AC027682.1-201ENST00000562846 899 ntBASIC26.03■■□□□ 1.76
DDX11Q96FC9 AC092666.2-201ENST00000613287 246 ntBASIC26.03■■□□□ 1.76
DDX11Q96FC9 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
DDX11Q96FC9 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC26.03■■□□□ 1.76
DDX11Q96FC9 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
DDX11Q96FC9 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
DDX11Q96FC9 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
DDX11Q96FC9 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
DDX11Q96FC9 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
DDX11Q96FC9 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
DDX11Q96FC9 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
DDX11Q96FC9 MIR5787-201ENST00000611784 55 ntBASIC26.02■■□□□ 1.76
DDX11Q96FC9 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
DDX11Q96FC9 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
DDX11Q96FC9 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC26.02■■□□□ 1.76
DDX11Q96FC9 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
DDX11Q96FC9 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
DDX11Q96FC9 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
DDX11Q96FC9 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.76
DDX11Q96FC9 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
DDX11Q96FC9 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
DDX11Q96FC9 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
DDX11Q96FC9 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
DDX11Q96FC9 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
DDX11Q96FC9 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC26■■□□□ 1.75
DDX11Q96FC9 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
DDX11Q96FC9 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC26■■□□□ 1.75
DDX11Q96FC9 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
DDX11Q96FC9 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC26■■□□□ 1.75
DDX11Q96FC9 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC26■■□□□ 1.75
DDX11Q96FC9 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
DDX11Q96FC9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC26■■□□□ 1.75
DDX11Q96FC9 GCA-201ENST00000233612 1694 ntTSL 2 BASIC25.99■■□□□ 1.75
DDX11Q96FC9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
DDX11Q96FC9 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
DDX11Q96FC9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC25.99■■□□□ 1.75
DDX11Q96FC9 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
DDX11Q96FC9 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
DDX11Q96FC9 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
DDX11Q96FC9 ASB1-202ENST00000409297 878 ntTSL 5 BASIC25.99■■□□□ 1.75
DDX11Q96FC9 AC006455.2-201ENST00000429931 906 ntBASIC25.99■■□□□ 1.75
DDX11Q96FC9 AC009086.3-201ENST00000623486 1008 ntBASIC25.99■■□□□ 1.75
DDX11Q96FC9 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC25.99■■□□□ 1.75
DDX11Q96FC9 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC25.99■■□□□ 1.75
DDX11Q96FC9 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC25.99■■□□□ 1.75
DDX11Q96FC9 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
DDX11Q96FC9 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
DDX11Q96FC9 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC25.99■■□□□ 1.75
DDX11Q96FC9 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC25.98■■□□□ 1.75
DDX11Q96FC9 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
DDX11Q96FC9 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
DDX11Q96FC9 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC25.98■■□□□ 1.75
DDX11Q96FC9 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
DDX11Q96FC9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
DDX11Q96FC9 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
DDX11Q96FC9 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
DDX11Q96FC9 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
DDX11Q96FC9 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
DDX11Q96FC9 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
DDX11Q96FC9 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC25.97■■□□□ 1.75
DDX11Q96FC9 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
DDX11Q96FC9 AC099791.1-201ENST00000416440 715 ntBASIC25.97■■□□□ 1.75
DDX11Q96FC9 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC25.97■■□□□ 1.75
DDX11Q96FC9 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC25.97■■□□□ 1.75
DDX11Q96FC9 NKILA-201ENST00000613231 537 ntTSL 4 BASIC25.97■■□□□ 1.75
DDX11Q96FC9 AC136469.2-201ENST00000623944 1028 ntBASIC25.97■■□□□ 1.75
DDX11Q96FC9 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
DDX11Q96FC9 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
DDX11Q96FC9 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
DDX11Q96FC9 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.75
DDX11Q96FC9 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
DDX11Q96FC9 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
DDX11Q96FC9 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
DDX11Q96FC9 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.74
DDX11Q96FC9 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
DDX11Q96FC9 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC25.95■■□□□ 1.74
DDX11Q96FC9 MIR3181-201ENST00000578512 73 ntBASIC25.95■■□□□ 1.74
DDX11Q96FC9 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.74
DDX11Q96FC9 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
DDX11Q96FC9 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC25.94■■□□□ 1.74
DDX11Q96FC9 AL117328.2-201ENST00000624617 1940 ntBASIC25.94■■□□□ 1.74
DDX11Q96FC9 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
DDX11Q96FC9 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
DDX11Q96FC9 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
DDX11Q96FC9 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC25.94■■□□□ 1.74
DDX11Q96FC9 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
DDX11Q96FC9 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC25.94■■□□□ 1.74
DDX11Q96FC9 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC25.94■■□□□ 1.74
DDX11Q96FC9 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC25.94■■□□□ 1.74
DDX11Q96FC9 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC25.94■■□□□ 1.74
DDX11Q96FC9 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
DDX11Q96FC9 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC25.94■■□□□ 1.74
DDX11Q96FC9 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
DDX11Q96FC9 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
DDX11Q96FC9 EP400NL-214ENST00000641289 2402 ntBASIC25.94■■□□□ 1.74
DDX11Q96FC9 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
DDX11Q96FC9 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
DDX11Q96FC9 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC25.93■■□□□ 1.74
DDX11Q96FC9 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms