Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CNOT9Q92600 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.22■□□□□ 0.83
CNOT9Q92600 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CNOT9Q92600 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.22■□□□□ 0.83
CNOT9Q92600 AC099791.2-201ENST00000605725 427 ntBASIC20.22■□□□□ 0.83
CNOT9Q92600 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CNOT9Q92600 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNOT9Q92600 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNOT9Q92600 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.22■□□□□ 0.83
CNOT9Q92600 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.22■□□□□ 0.83
CNOT9Q92600 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNOT9Q92600 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
CNOT9Q92600 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNOT9Q92600 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNOT9Q92600 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNOT9Q92600 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CNOT9Q92600 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CNOT9Q92600 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNOT9Q92600 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CNOT9Q92600 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CNOT9Q92600 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.21■□□□□ 0.83
CNOT9Q92600 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.21■□□□□ 0.83
CNOT9Q92600 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CNOT9Q92600 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNOT9Q92600 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
CNOT9Q92600 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNOT9Q92600 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNOT9Q92600 ECEL1P1-201ENST00000373592 1742 ntBASIC20.21■□□□□ 0.83
CNOT9Q92600 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNOT9Q92600 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.21■□□□□ 0.83
CNOT9Q92600 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.21■□□□□ 0.83
CNOT9Q92600 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNOT9Q92600 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNOT9Q92600 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNOT9Q92600 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.2■□□□□ 0.82
CNOT9Q92600 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CNOT9Q92600 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNOT9Q92600 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.2■□□□□ 0.82
CNOT9Q92600 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
CNOT9Q92600 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT9Q92600 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.19■□□□□ 0.82
CNOT9Q92600 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT9Q92600 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT9Q92600 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT9Q92600 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT9Q92600 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT9Q92600 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.19■□□□□ 0.82
CNOT9Q92600 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.19■□□□□ 0.82
CNOT9Q92600 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.19■□□□□ 0.82
CNOT9Q92600 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.19■□□□□ 0.82
CNOT9Q92600 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.19■□□□□ 0.82
CNOT9Q92600 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.19■□□□□ 0.82
CNOT9Q92600 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT9Q92600 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.19■□□□□ 0.82
CNOT9Q92600 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CNOT9Q92600 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT9Q92600 LINC01960-201ENST00000563759 1884 ntBASIC20.19■□□□□ 0.82
CNOT9Q92600 LINC00526-201ENST00000581067 1875 ntBASIC20.19■□□□□ 0.82
CNOT9Q92600 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.19■□□□□ 0.82
CNOT9Q92600 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CNOT9Q92600 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CNOT9Q92600 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT9Q92600 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CNOT9Q92600 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT9Q92600 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
CNOT9Q92600 AC242852.2-201ENST00000615738 1807 ntBASIC20.18■□□□□ 0.82
CNOT9Q92600 AC080038.3-201ENST00000623346 1952 ntBASIC20.18■□□□□ 0.82
CNOT9Q92600 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNOT9Q92600 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNOT9Q92600 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.18■□□□□ 0.82
CNOT9Q92600 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.18■□□□□ 0.82
CNOT9Q92600 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.18■□□□□ 0.82
CNOT9Q92600 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNOT9Q92600 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNOT9Q92600 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.18■□□□□ 0.82
CNOT9Q92600 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNOT9Q92600 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNOT9Q92600 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.18■□□□□ 0.82
CNOT9Q92600 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNOT9Q92600 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.18■□□□□ 0.82
CNOT9Q92600 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CNOT9Q92600 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNOT9Q92600 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
CNOT9Q92600 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CNOT9Q92600 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNOT9Q92600 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.17■□□□□ 0.82
CNOT9Q92600 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNOT9Q92600 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNOT9Q92600 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.17■□□□□ 0.82
CNOT9Q92600 SRD5A1P1-201ENST00000442297 786 ntBASIC20.17■□□□□ 0.82
CNOT9Q92600 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.17■□□□□ 0.82
CNOT9Q92600 pRNA.6-201ENST00000610482 90 ntBASIC20.17■□□□□ 0.82
CNOT9Q92600 pRNA.5-201ENST00000612139 90 ntBASIC20.17■□□□□ 0.82
CNOT9Q92600 pRNA.11-201ENST00000618423 90 ntBASIC20.17■□□□□ 0.82
CNOT9Q92600 pRNA.13-201ENST00000619112 90 ntBASIC20.17■□□□□ 0.82
CNOT9Q92600 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CNOT9Q92600 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNOT9Q92600 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNOT9Q92600 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNOT9Q92600 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms