Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SVIPQ8NHG7 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SVIPQ8NHG7 DUSP10-201ENST00000366899 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SVIPQ8NHG7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SVIPQ8NHG7 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SVIPQ8NHG7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SVIPQ8NHG7 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SVIPQ8NHG7 AL137784.3-201ENST00000623858 2288 ntBASIC13.95□□□□□ -0.18
SVIPQ8NHG7 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SVIPQ8NHG7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC13.95□□□□□ -0.18
SVIPQ8NHG7 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SVIPQ8NHG7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SVIPQ8NHG7 AC124067.4-201ENST00000519691 2379 ntBASIC13.95□□□□□ -0.18
SVIPQ8NHG7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SVIPQ8NHG7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC13.94□□□□□ -0.18
SVIPQ8NHG7 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SVIPQ8NHG7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
SVIPQ8NHG7 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SVIPQ8NHG7 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SVIPQ8NHG7 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SVIPQ8NHG7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SVIPQ8NHG7 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SVIPQ8NHG7 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SVIPQ8NHG7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SVIPQ8NHG7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SVIPQ8NHG7 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SVIPQ8NHG7 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SVIPQ8NHG7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
SVIPQ8NHG7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SVIPQ8NHG7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SVIPQ8NHG7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
SVIPQ8NHG7 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.94□□□□□ -0.18
SVIPQ8NHG7 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SVIPQ8NHG7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SVIPQ8NHG7 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SVIPQ8NHG7 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.93□□□□□ -0.18
SVIPQ8NHG7 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC13.93□□□□□ -0.18
SVIPQ8NHG7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SVIPQ8NHG7 AC087741.3-201ENST00000624270 1347 ntBASIC13.93□□□□□ -0.18
SVIPQ8NHG7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SVIPQ8NHG7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SVIPQ8NHG7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SVIPQ8NHG7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
SVIPQ8NHG7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SVIPQ8NHG7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SVIPQ8NHG7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SVIPQ8NHG7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
SVIPQ8NHG7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SVIPQ8NHG7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC13.93□□□□□ -0.18
SVIPQ8NHG7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SVIPQ8NHG7 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SVIPQ8NHG7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SVIPQ8NHG7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
SVIPQ8NHG7 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SVIPQ8NHG7 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SVIPQ8NHG7 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SVIPQ8NHG7 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SVIPQ8NHG7 AC127496.7-201ENST00000625110 1798 ntBASIC13.92□□□□□ -0.18
SVIPQ8NHG7 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SVIPQ8NHG7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SVIPQ8NHG7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SVIPQ8NHG7 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SVIPQ8NHG7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SVIPQ8NHG7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SVIPQ8NHG7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SVIPQ8NHG7 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC13.92□□□□□ -0.18
SVIPQ8NHG7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
SVIPQ8NHG7 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SVIPQ8NHG7 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SVIPQ8NHG7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SVIPQ8NHG7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SVIPQ8NHG7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SVIPQ8NHG7 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SVIPQ8NHG7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SVIPQ8NHG7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC13.91□□□□□ -0.18
SVIPQ8NHG7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SVIPQ8NHG7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC13.91□□□□□ -0.18
SVIPQ8NHG7 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SVIPQ8NHG7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SVIPQ8NHG7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SVIPQ8NHG7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
SVIPQ8NHG7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SVIPQ8NHG7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SVIPQ8NHG7 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SVIPQ8NHG7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
SVIPQ8NHG7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SVIPQ8NHG7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC13.91□□□□□ -0.18
SVIPQ8NHG7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC13.9□□□□□ -0.18
SVIPQ8NHG7 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SVIPQ8NHG7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SVIPQ8NHG7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SVIPQ8NHG7 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SVIPQ8NHG7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SVIPQ8NHG7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SVIPQ8NHG7 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SVIPQ8NHG7 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SVIPQ8NHG7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SVIPQ8NHG7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SVIPQ8NHG7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SVIPQ8NHG7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms