Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RNF169Q8NCN4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RNF169Q8NCN4 NTF6G-201ENST00000591094 616 ntBASIC23.96■■□□□ 1.43
RNF169Q8NCN4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF169Q8NCN4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF169Q8NCN4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF169Q8NCN4 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.96■■□□□ 1.43
RNF169Q8NCN4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF169Q8NCN4 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.43
RNF169Q8NCN4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC23.95■■□□□ 1.42
RNF169Q8NCN4 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.95■■□□□ 1.42
RNF169Q8NCN4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.42
RNF169Q8NCN4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
RNF169Q8NCN4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
RNF169Q8NCN4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.95■■□□□ 1.42
RNF169Q8NCN4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.95■■□□□ 1.42
RNF169Q8NCN4 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RNF169Q8NCN4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
RNF169Q8NCN4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.95■■□□□ 1.42
RNF169Q8NCN4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.94■■□□□ 1.42
RNF169Q8NCN4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.94■■□□□ 1.42
RNF169Q8NCN4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
RNF169Q8NCN4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
RNF169Q8NCN4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
RNF169Q8NCN4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.94■■□□□ 1.42
RNF169Q8NCN4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RNF169Q8NCN4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF169Q8NCN4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
RNF169Q8NCN4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
RNF169Q8NCN4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF169Q8NCN4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RNF169Q8NCN4 AC090192.1-201ENST00000517740 490 ntBASIC23.93■■□□□ 1.42
RNF169Q8NCN4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC23.93■■□□□ 1.42
RNF169Q8NCN4 TERF1P2-201ENST00000583350 1212 ntBASIC23.93■■□□□ 1.42
RNF169Q8NCN4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC23.93■■□□□ 1.42
RNF169Q8NCN4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.93■■□□□ 1.42
RNF169Q8NCN4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RNF169Q8NCN4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
RNF169Q8NCN4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF169Q8NCN4 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF169Q8NCN4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.92■■□□□ 1.42
RNF169Q8NCN4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC23.92■■□□□ 1.42
RNF169Q8NCN4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RNF169Q8NCN4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.92■■□□□ 1.42
RNF169Q8NCN4 AC004911.1-201ENST00000416316 871 ntBASIC23.92■■□□□ 1.42
RNF169Q8NCN4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.92■■□□□ 1.42
RNF169Q8NCN4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC23.92■■□□□ 1.42
RNF169Q8NCN4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.92■■□□□ 1.42
RNF169Q8NCN4 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC23.92■■□□□ 1.42
RNF169Q8NCN4 AC092437.1-201ENST00000624794 1048 ntBASIC23.92■■□□□ 1.42
RNF169Q8NCN4 RARRES2P11-201ENST00000635158 484 ntBASIC23.92■■□□□ 1.42
RNF169Q8NCN4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.92■■□□□ 1.42
RNF169Q8NCN4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RNF169Q8NCN4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF169Q8NCN4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
RNF169Q8NCN4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.91■■□□□ 1.42
RNF169Q8NCN4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF169Q8NCN4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF169Q8NCN4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
RNF169Q8NCN4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
RNF169Q8NCN4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.91■■□□□ 1.42
RNF169Q8NCN4 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RNF169Q8NCN4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
RNF169Q8NCN4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.91■■□□□ 1.42
RNF169Q8NCN4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF169Q8NCN4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RNF169Q8NCN4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RNF169Q8NCN4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
RNF169Q8NCN4 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.9■■□□□ 1.42
RNF169Q8NCN4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.9■■□□□ 1.42
RNF169Q8NCN4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC23.9■■□□□ 1.42
RNF169Q8NCN4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RNF169Q8NCN4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RNF169Q8NCN4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.9■■□□□ 1.42
RNF169Q8NCN4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RNF169Q8NCN4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RNF169Q8NCN4 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RNF169Q8NCN4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.9■■□□□ 1.42
RNF169Q8NCN4 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC23.9■■□□□ 1.42
RNF169Q8NCN4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC23.9■■□□□ 1.42
RNF169Q8NCN4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
RNF169Q8NCN4 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
RNF169Q8NCN4 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RNF169Q8NCN4 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
RNF169Q8NCN4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RNF169Q8NCN4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
RNF169Q8NCN4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
RNF169Q8NCN4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.9■■□□□ 1.42
RNF169Q8NCN4 AC093323.1-202ENST00000635031 2045 ntBASIC23.89■■□□□ 1.42
RNF169Q8NCN4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
RNF169Q8NCN4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
RNF169Q8NCN4 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
RNF169Q8NCN4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
RNF169Q8NCN4 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RNF169Q8NCN4 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.89■■□□□ 1.41
RNF169Q8NCN4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
RNF169Q8NCN4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.89■■□□□ 1.41
RNF169Q8NCN4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.41
RNF169Q8NCN4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.89■■□□□ 1.41
RNF169Q8NCN4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.89■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms