Protein–RNA interactions for Protein: Q8N9B8

RASGEF1A, Ras-GEF domain-containing family member 1A, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1AQ8N9B8 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RASGEF1AQ8N9B8 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
RASGEF1AQ8N9B8 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.69■■□□□ 1.06
RASGEF1AQ8N9B8 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.69■■□□□ 1.06
RASGEF1AQ8N9B8 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.69■■□□□ 1.06
RASGEF1AQ8N9B8 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.69■■□□□ 1.06
RASGEF1AQ8N9B8 CA15P2-201ENST00000611168 834 ntBASIC21.69■■□□□ 1.06
RASGEF1AQ8N9B8 RASA4CP-201ENST00000424092 1398 ntBASIC21.69■■□□□ 1.06
RASGEF1AQ8N9B8 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RASGEF1AQ8N9B8 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
RASGEF1AQ8N9B8 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RASGEF1AQ8N9B8 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
RASGEF1AQ8N9B8 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.69■■□□□ 1.06
RASGEF1AQ8N9B8 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RASGEF1AQ8N9B8 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
RASGEF1AQ8N9B8 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RASGEF1AQ8N9B8 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RASGEF1AQ8N9B8 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.68■■□□□ 1.06
RASGEF1AQ8N9B8 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RASGEF1AQ8N9B8 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RASGEF1AQ8N9B8 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RASGEF1AQ8N9B8 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.68■■□□□ 1.06
RASGEF1AQ8N9B8 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
RASGEF1AQ8N9B8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
RASGEF1AQ8N9B8 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RASGEF1AQ8N9B8 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.68■■□□□ 1.06
RASGEF1AQ8N9B8 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RASGEF1AQ8N9B8 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.68■■□□□ 1.06
RASGEF1AQ8N9B8 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.67■■□□□ 1.06
RASGEF1AQ8N9B8 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RASGEF1AQ8N9B8 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
RASGEF1AQ8N9B8 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RASGEF1AQ8N9B8 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RASGEF1AQ8N9B8 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
RASGEF1AQ8N9B8 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.67■■□□□ 1.06
RASGEF1AQ8N9B8 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.67■■□□□ 1.06
RASGEF1AQ8N9B8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RASGEF1AQ8N9B8 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RASGEF1AQ8N9B8 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
RASGEF1AQ8N9B8 AC126544.1-201ENST00000580842 1059 ntBASIC21.67■■□□□ 1.06
RASGEF1AQ8N9B8 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
RASGEF1AQ8N9B8 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.66■■□□□ 1.06
RASGEF1AQ8N9B8 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
RASGEF1AQ8N9B8 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RASGEF1AQ8N9B8 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
RASGEF1AQ8N9B8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.66■■□□□ 1.06
RASGEF1AQ8N9B8 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.66■■□□□ 1.06
RASGEF1AQ8N9B8 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.66■■□□□ 1.06
RASGEF1AQ8N9B8 AL031602.1-201ENST00000633169 911 ntBASIC21.66■■□□□ 1.06
RASGEF1AQ8N9B8 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RASGEF1AQ8N9B8 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
RASGEF1AQ8N9B8 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RASGEF1AQ8N9B8 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.66■■□□□ 1.06
RASGEF1AQ8N9B8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
RASGEF1AQ8N9B8 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RASGEF1AQ8N9B8 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.65■■□□□ 1.06
RASGEF1AQ8N9B8 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RASGEF1AQ8N9B8 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
RASGEF1AQ8N9B8 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RASGEF1AQ8N9B8 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.65■■□□□ 1.06
RASGEF1AQ8N9B8 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RASGEF1AQ8N9B8 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RASGEF1AQ8N9B8 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RASGEF1AQ8N9B8 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RASGEF1AQ8N9B8 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
RASGEF1AQ8N9B8 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RASGEF1AQ8N9B8 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RASGEF1AQ8N9B8 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.64■■□□□ 1.06
RASGEF1AQ8N9B8 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
RASGEF1AQ8N9B8 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RASGEF1AQ8N9B8 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
RASGEF1AQ8N9B8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RASGEF1AQ8N9B8 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RASGEF1AQ8N9B8 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.64■■□□□ 1.05
RASGEF1AQ8N9B8 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.64■■□□□ 1.05
RASGEF1AQ8N9B8 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
RASGEF1AQ8N9B8 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RASGEF1AQ8N9B8 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.64■■□□□ 1.05
RASGEF1AQ8N9B8 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RASGEF1AQ8N9B8 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.64■■□□□ 1.05
RASGEF1AQ8N9B8 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.64■■□□□ 1.05
RASGEF1AQ8N9B8 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
RASGEF1AQ8N9B8 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.64■■□□□ 1.05
RASGEF1AQ8N9B8 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RASGEF1AQ8N9B8 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RASGEF1AQ8N9B8 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
RASGEF1AQ8N9B8 LINC01960-201ENST00000563759 1884 ntBASIC21.63■■□□□ 1.05
RASGEF1AQ8N9B8 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.63■■□□□ 1.05
RASGEF1AQ8N9B8 AP005435.1-201ENST00000529293 1178 ntBASIC21.63■■□□□ 1.05
RASGEF1AQ8N9B8 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.63■■□□□ 1.05
RASGEF1AQ8N9B8 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RASGEF1AQ8N9B8 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RASGEF1AQ8N9B8 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RASGEF1AQ8N9B8 AC019069.1-201ENST00000610008 1333 ntBASIC21.62■■□□□ 1.05
RASGEF1AQ8N9B8 C1orf229-201ENST00000623686 2258 ntBASIC21.62■■□□□ 1.05
RASGEF1AQ8N9B8 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
RASGEF1AQ8N9B8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RASGEF1AQ8N9B8 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.62■■□□□ 1.05
RASGEF1AQ8N9B8 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.62■■□□□ 1.05
RASGEF1AQ8N9B8 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms