Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC14.74□□□□□ -0.05
LINC01561Q8N1V8 LINC01960-201ENST00000563759 1884 ntBASIC14.74□□□□□ -0.05
LINC01561Q8N1V8 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01561Q8N1V8 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
LINC01561Q8N1V8 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01561Q8N1V8 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01561Q8N1V8 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC14.73□□□□□ -0.05
LINC01561Q8N1V8 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC14.73□□□□□ -0.05
LINC01561Q8N1V8 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC14.73□□□□□ -0.05
LINC01561Q8N1V8 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01561Q8N1V8 BEX3-202ENST00000372634 753 ntTSL 2 BASIC14.73□□□□□ -0.05
LINC01561Q8N1V8 CA15P2-201ENST00000611168 834 ntBASIC14.73□□□□□ -0.05
LINC01561Q8N1V8 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC14.73□□□□□ -0.05
LINC01561Q8N1V8 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01561Q8N1V8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01561Q8N1V8 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
LINC01561Q8N1V8 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC14.73□□□□□ -0.05
LINC01561Q8N1V8 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01561Q8N1V8 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01561Q8N1V8 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
LINC01561Q8N1V8 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC14.72□□□□□ -0.05
LINC01561Q8N1V8 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01561Q8N1V8 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC14.72□□□□□ -0.05
LINC01561Q8N1V8 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01561Q8N1V8 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01561Q8N1V8 TSPY13P-201ENST00000338964 914 ntBASIC14.72□□□□□ -0.05
LINC01561Q8N1V8 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC14.72□□□□□ -0.05
LINC01561Q8N1V8 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC14.72□□□□□ -0.05
LINC01561Q8N1V8 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01561Q8N1V8 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01561Q8N1V8 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01561Q8N1V8 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC14.72□□□□□ -0.05
LINC01561Q8N1V8 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01561Q8N1V8 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC14.72□□□□□ -0.05
LINC01561Q8N1V8 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC14.71□□□□□ -0.05
LINC01561Q8N1V8 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC14.71□□□□□ -0.05
LINC01561Q8N1V8 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC14.71□□□□□ -0.05
LINC01561Q8N1V8 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
LINC01561Q8N1V8 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LINC01561Q8N1V8 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LINC01561Q8N1V8 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC14.71□□□□□ -0.05
LINC01561Q8N1V8 AC010980.1-201ENST00000587192 1142 ntBASIC14.71□□□□□ -0.05
LINC01561Q8N1V8 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
LINC01561Q8N1V8 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC01561Q8N1V8 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC01561Q8N1V8 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC01561Q8N1V8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
LINC01561Q8N1V8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
LINC01561Q8N1V8 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC14.71□□□□□ -0.06
LINC01561Q8N1V8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
LINC01561Q8N1V8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LINC01561Q8N1V8 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LINC01561Q8N1V8 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC14.71□□□□□ -0.06
LINC01561Q8N1V8 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01561Q8N1V8 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01561Q8N1V8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01561Q8N1V8 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
LINC01561Q8N1V8 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01561Q8N1V8 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01561Q8N1V8 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01561Q8N1V8 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01561Q8N1V8 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01561Q8N1V8 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01561Q8N1V8 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC14.7□□□□□ -0.06
LINC01561Q8N1V8 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
LINC01561Q8N1V8 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC14.7□□□□□ -0.06
LINC01561Q8N1V8 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC14.7□□□□□ -0.06
LINC01561Q8N1V8 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC14.7□□□□□ -0.06
LINC01561Q8N1V8 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01561Q8N1V8 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC14.7□□□□□ -0.06
LINC01561Q8N1V8 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01561Q8N1V8 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC14.7□□□□□ -0.06
LINC01561Q8N1V8 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
LINC01561Q8N1V8 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01561Q8N1V8 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01561Q8N1V8 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01561Q8N1V8 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01561Q8N1V8 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
LINC01561Q8N1V8 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01561Q8N1V8 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01561Q8N1V8 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01561Q8N1V8 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01561Q8N1V8 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01561Q8N1V8 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC14.69□□□□□ -0.06
LINC01561Q8N1V8 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC14.69□□□□□ -0.06
LINC01561Q8N1V8 TK2-216ENST00000564917 1156 ntTSL 3 BASIC14.69□□□□□ -0.06
LINC01561Q8N1V8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC14.69□□□□□ -0.06
LINC01561Q8N1V8 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC14.69□□□□□ -0.06
LINC01561Q8N1V8 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
LINC01561Q8N1V8 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01561Q8N1V8 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
LINC01561Q8N1V8 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC14.69□□□□□ -0.06
LINC01561Q8N1V8 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01561Q8N1V8 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01561Q8N1V8 RNF165-205ENST00000588679 2904 ntBASIC14.69□□□□□ -0.06
LINC01561Q8N1V8 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01561Q8N1V8 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01561Q8N1V8 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01561Q8N1V8 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
LINC01561Q8N1V8 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms