Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
NPAS4Q8IUM7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NPAS4Q8IUM7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.82■■□□□ 1.4
NPAS4Q8IUM7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.82■■□□□ 1.4
NPAS4Q8IUM7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NPAS4Q8IUM7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NPAS4Q8IUM7 HSCB-202ENST00000398941 955 ntTSL 2 BASIC23.82■■□□□ 1.4
NPAS4Q8IUM7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC23.82■■□□□ 1.4
NPAS4Q8IUM7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC23.82■■□□□ 1.4
NPAS4Q8IUM7 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NPAS4Q8IUM7 AC004854.2-201ENST00000608450 1441 ntBASIC23.82■■□□□ 1.4
NPAS4Q8IUM7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
NPAS4Q8IUM7 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NPAS4Q8IUM7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC23.81■■□□□ 1.4
NPAS4Q8IUM7 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NPAS4Q8IUM7 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
NPAS4Q8IUM7 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC23.81■■□□□ 1.4
NPAS4Q8IUM7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.81■■□□□ 1.4
NPAS4Q8IUM7 RAP2CP1-201ENST00000605103 478 ntBASIC23.81■■□□□ 1.4
NPAS4Q8IUM7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NPAS4Q8IUM7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NPAS4Q8IUM7 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NPAS4Q8IUM7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.81■■□□□ 1.4
NPAS4Q8IUM7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NPAS4Q8IUM7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
NPAS4Q8IUM7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.8■■□□□ 1.4
NPAS4Q8IUM7 LINC01124-201ENST00000409786 2117 ntBASIC23.8■■□□□ 1.4
NPAS4Q8IUM7 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.8■■□□□ 1.4
NPAS4Q8IUM7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
NPAS4Q8IUM7 SMUG1P1-201ENST00000590640 811 ntBASIC23.8■■□□□ 1.4
NPAS4Q8IUM7 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC23.8■■□□□ 1.4
NPAS4Q8IUM7 AC073111.5-205ENST00000641717 521 ntBASIC23.8■■□□□ 1.4
NPAS4Q8IUM7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
NPAS4Q8IUM7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.8■■□□□ 1.4
NPAS4Q8IUM7 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NPAS4Q8IUM7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NPAS4Q8IUM7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NPAS4Q8IUM7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
NPAS4Q8IUM7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
NPAS4Q8IUM7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NPAS4Q8IUM7 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
NPAS4Q8IUM7 CDCA4P2-201ENST00000441182 718 ntBASIC23.79■■□□□ 1.4
NPAS4Q8IUM7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23.79■■□□□ 1.4
NPAS4Q8IUM7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
NPAS4Q8IUM7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
NPAS4Q8IUM7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
NPAS4Q8IUM7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.78■■□□□ 1.4
NPAS4Q8IUM7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NPAS4Q8IUM7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.78■■□□□ 1.4
NPAS4Q8IUM7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC23.78■■□□□ 1.4
NPAS4Q8IUM7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC23.78■■□□□ 1.4
NPAS4Q8IUM7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.78■■□□□ 1.4
NPAS4Q8IUM7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NPAS4Q8IUM7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.78■■□□□ 1.4
NPAS4Q8IUM7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NPAS4Q8IUM7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.78■■□□□ 1.4
NPAS4Q8IUM7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.78■■□□□ 1.4
NPAS4Q8IUM7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.78■■□□□ 1.4
NPAS4Q8IUM7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
NPAS4Q8IUM7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.77■■□□□ 1.4
NPAS4Q8IUM7 KRT19P1-201ENST00000405746 1186 ntBASIC23.77■■□□□ 1.4
NPAS4Q8IUM7 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23.77■■□□□ 1.4
NPAS4Q8IUM7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC23.77■■□□□ 1.4
NPAS4Q8IUM7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
NPAS4Q8IUM7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23.77■■□□□ 1.4
NPAS4Q8IUM7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC23.77■■□□□ 1.4
NPAS4Q8IUM7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NPAS4Q8IUM7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.77■■□□□ 1.4
NPAS4Q8IUM7 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NPAS4Q8IUM7 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
NPAS4Q8IUM7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NPAS4Q8IUM7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NPAS4Q8IUM7 AC004812.2-201ENST00000611079 2094 ntBASIC23.76■■□□□ 1.39
NPAS4Q8IUM7 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.76■■□□□ 1.39
NPAS4Q8IUM7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.76■■□□□ 1.39
NPAS4Q8IUM7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
NPAS4Q8IUM7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NPAS4Q8IUM7 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.76■■□□□ 1.39
NPAS4Q8IUM7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.76■■□□□ 1.39
NPAS4Q8IUM7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NPAS4Q8IUM7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NPAS4Q8IUM7 AL353803.4-201ENST00000565882 1934 ntBASIC23.76■■□□□ 1.39
NPAS4Q8IUM7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.76■■□□□ 1.39
NPAS4Q8IUM7 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
NPAS4Q8IUM7 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NPAS4Q8IUM7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC23.75■■□□□ 1.39
NPAS4Q8IUM7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.75■■□□□ 1.39
NPAS4Q8IUM7 BID-214ENST00000617586 542 ntTSL 5 BASIC23.75■■□□□ 1.39
NPAS4Q8IUM7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NPAS4Q8IUM7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NPAS4Q8IUM7 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
NPAS4Q8IUM7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
NPAS4Q8IUM7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
NPAS4Q8IUM7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.74■■□□□ 1.39
NPAS4Q8IUM7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
NPAS4Q8IUM7 WWOX-218ENST00000627394 894 ntTSL 5 BASIC23.74■■□□□ 1.39
NPAS4Q8IUM7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC23.74■■□□□ 1.39
NPAS4Q8IUM7 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
NPAS4Q8IUM7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.74■■□□□ 1.39
NPAS4Q8IUM7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms