Protein–RNA interactions for Protein: Q86UP3

ZFHX4, Zinc finger homeobox protein 4, humanhuman

Predictions only

Length 3,567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX4Q86UP3 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZFHX4Q86UP3 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZFHX4Q86UP3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
ZFHX4Q86UP3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ZFHX4Q86UP3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.88■□□□□ 0.93
ZFHX4Q86UP3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ZFHX4Q86UP3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZFHX4Q86UP3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
ZFHX4Q86UP3 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
ZFHX4Q86UP3 MIR4497-201ENST00000583208 89 ntBASIC20.87■□□□□ 0.93
ZFHX4Q86UP3 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ZFHX4Q86UP3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ZFHX4Q86UP3 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZFHX4Q86UP3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.87■□□□□ 0.93
ZFHX4Q86UP3 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.87■□□□□ 0.93
ZFHX4Q86UP3 RCN1P1-201ENST00000400413 996 ntBASIC20.87■□□□□ 0.93
ZFHX4Q86UP3 AL158047.1-201ENST00000445918 881 ntBASIC20.87■□□□□ 0.93
ZFHX4Q86UP3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.87■□□□□ 0.93
ZFHX4Q86UP3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.87■□□□□ 0.93
ZFHX4Q86UP3 MFSD11-216ENST00000590393 1141 ntBASIC20.87■□□□□ 0.93
ZFHX4Q86UP3 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.87■□□□□ 0.93
ZFHX4Q86UP3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
ZFHX4Q86UP3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZFHX4Q86UP3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZFHX4Q86UP3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZFHX4Q86UP3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.86■□□□□ 0.93
ZFHX4Q86UP3 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.86■□□□□ 0.93
ZFHX4Q86UP3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZFHX4Q86UP3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZFHX4Q86UP3 AC010525.1-201ENST00000585559 441 ntBASIC20.86■□□□□ 0.93
ZFHX4Q86UP3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
ZFHX4Q86UP3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZFHX4Q86UP3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZFHX4Q86UP3 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZFHX4Q86UP3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZFHX4Q86UP3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZFHX4Q86UP3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.86■□□□□ 0.93
ZFHX4Q86UP3 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZFHX4Q86UP3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
ZFHX4Q86UP3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.85■□□□□ 0.93
ZFHX4Q86UP3 AC128676.1-201ENST00000454392 318 ntBASIC20.85■□□□□ 0.93
ZFHX4Q86UP3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.85■□□□□ 0.93
ZFHX4Q86UP3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
ZFHX4Q86UP3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZFHX4Q86UP3 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ZFHX4Q86UP3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZFHX4Q86UP3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
ZFHX4Q86UP3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
ZFHX4Q86UP3 AC005181.1-201ENST00000604782 1256 ntBASIC20.85■□□□□ 0.93
ZFHX4Q86UP3 AC133041.1-202ENST00000642053 222 ntBASIC20.85■□□□□ 0.93
ZFHX4Q86UP3 AL121749.1-202ENST00000609313 2153 ntBASIC20.84■□□□□ 0.93
ZFHX4Q86UP3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZFHX4Q86UP3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZFHX4Q86UP3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZFHX4Q86UP3 SLC29A4P1-201ENST00000398760 971 ntBASIC20.84■□□□□ 0.93
ZFHX4Q86UP3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ZFHX4Q86UP3 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.84■□□□□ 0.93
ZFHX4Q86UP3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.84■□□□□ 0.93
ZFHX4Q86UP3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.84■□□□□ 0.93
ZFHX4Q86UP3 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
ZFHX4Q86UP3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
ZFHX4Q86UP3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ZFHX4Q86UP3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.84■□□□□ 0.93
ZFHX4Q86UP3 FP325331.1-202ENST00000623531 1380 ntBASIC20.84■□□□□ 0.93
ZFHX4Q86UP3 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.84■□□□□ 0.93
ZFHX4Q86UP3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.84■□□□□ 0.93
ZFHX4Q86UP3 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZFHX4Q86UP3 KRT18P11-201ENST00000435214 1283 ntBASIC20.84■□□□□ 0.93
ZFHX4Q86UP3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ZFHX4Q86UP3 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
ZFHX4Q86UP3 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
ZFHX4Q86UP3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.83■□□□□ 0.93
ZFHX4Q86UP3 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.83■□□□□ 0.93
ZFHX4Q86UP3 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ZFHX4Q86UP3 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.83■□□□□ 0.92
ZFHX4Q86UP3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ZFHX4Q86UP3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.83■□□□□ 0.92
ZFHX4Q86UP3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.83■□□□□ 0.92
ZFHX4Q86UP3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.83■□□□□ 0.92
ZFHX4Q86UP3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ZFHX4Q86UP3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZFHX4Q86UP3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.82■□□□□ 0.92
ZFHX4Q86UP3 RARRES2P4-201ENST00000514074 484 ntBASIC20.82■□□□□ 0.92
ZFHX4Q86UP3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZFHX4Q86UP3 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZFHX4Q86UP3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZFHX4Q86UP3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZFHX4Q86UP3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZFHX4Q86UP3 RNA5SP413-201ENST00000516373 109 ntBASIC20.82■□□□□ 0.92
ZFHX4Q86UP3 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZFHX4Q86UP3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
ZFHX4Q86UP3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZFHX4Q86UP3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.82■□□□□ 0.92
ZFHX4Q86UP3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.82■□□□□ 0.92
ZFHX4Q86UP3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZFHX4Q86UP3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZFHX4Q86UP3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.81■□□□□ 0.92
ZFHX4Q86UP3 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.81■□□□□ 0.92
ZFHX4Q86UP3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZFHX4Q86UP3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms