Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CSMD2Q7Z408 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CSMD2Q7Z408 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CSMD2Q7Z408 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSMD2Q7Z408 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSMD2Q7Z408 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSMD2Q7Z408 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSMD2Q7Z408 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CSMD2Q7Z408 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.8■□□□□ 0.6
CSMD2Q7Z408 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSMD2Q7Z408 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.79■□□□□ 0.6
CSMD2Q7Z408 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.79■□□□□ 0.6
CSMD2Q7Z408 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSMD2Q7Z408 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.79■□□□□ 0.6
CSMD2Q7Z408 SLC7A5P1-201ENST00000568957 537 ntBASIC18.79■□□□□ 0.6
CSMD2Q7Z408 AC231657.2-201ENST00000624556 255 ntBASIC18.79■□□□□ 0.6
CSMD2Q7Z408 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.79■□□□□ 0.6
CSMD2Q7Z408 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CSMD2Q7Z408 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CSMD2Q7Z408 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.79■□□□□ 0.6
CSMD2Q7Z408 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSMD2Q7Z408 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSMD2Q7Z408 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSMD2Q7Z408 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSMD2Q7Z408 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSMD2Q7Z408 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.79■□□□□ 0.6
CSMD2Q7Z408 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.79■□□□□ 0.6
CSMD2Q7Z408 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CSMD2Q7Z408 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.78■□□□□ 0.6
CSMD2Q7Z408 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSMD2Q7Z408 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CSMD2Q7Z408 ALDH1A3-203ENST00000557963 1670 ntBASIC18.78■□□□□ 0.6
CSMD2Q7Z408 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.78■□□□□ 0.6
CSMD2Q7Z408 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.78■□□□□ 0.6
CSMD2Q7Z408 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CSMD2Q7Z408 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC18.78■□□□□ 0.6
CSMD2Q7Z408 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC18.77■□□□□ 0.6
CSMD2Q7Z408 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.77■□□□□ 0.6
CSMD2Q7Z408 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.77■□□□□ 0.6
CSMD2Q7Z408 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.77■□□□□ 0.6
CSMD2Q7Z408 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSMD2Q7Z408 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.77■□□□□ 0.6
CSMD2Q7Z408 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSMD2Q7Z408 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.77■□□□□ 0.6
CSMD2Q7Z408 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.77■□□□□ 0.6
CSMD2Q7Z408 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.77■□□□□ 0.6
CSMD2Q7Z408 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
CSMD2Q7Z408 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.77■□□□□ 0.6
CSMD2Q7Z408 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.77■□□□□ 0.6
CSMD2Q7Z408 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSMD2Q7Z408 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
CSMD2Q7Z408 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.77■□□□□ 0.59
CSMD2Q7Z408 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.77■□□□□ 0.59
CSMD2Q7Z408 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSMD2Q7Z408 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSMD2Q7Z408 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.76■□□□□ 0.59
CSMD2Q7Z408 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSMD2Q7Z408 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CSMD2Q7Z408 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CSMD2Q7Z408 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.76■□□□□ 0.59
CSMD2Q7Z408 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CSMD2Q7Z408 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CSMD2Q7Z408 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSMD2Q7Z408 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.76■□□□□ 0.59
CSMD2Q7Z408 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSMD2Q7Z408 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSMD2Q7Z408 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CSMD2Q7Z408 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.76■□□□□ 0.59
CSMD2Q7Z408 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSMD2Q7Z408 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.75■□□□□ 0.59
CSMD2Q7Z408 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC18.75■□□□□ 0.59
CSMD2Q7Z408 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSMD2Q7Z408 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.75■□□□□ 0.59
CSMD2Q7Z408 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.75■□□□□ 0.59
CSMD2Q7Z408 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSMD2Q7Z408 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSMD2Q7Z408 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.75■□□□□ 0.59
CSMD2Q7Z408 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSMD2Q7Z408 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.75■□□□□ 0.59
CSMD2Q7Z408 AP006294.2-201ENST00000641667 209 ntBASIC18.75■□□□□ 0.59
CSMD2Q7Z408 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.75■□□□□ 0.59
CSMD2Q7Z408 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSMD2Q7Z408 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CSMD2Q7Z408 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSMD2Q7Z408 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CSMD2Q7Z408 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.75■□□□□ 0.59
CSMD2Q7Z408 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CSMD2Q7Z408 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.75■□□□□ 0.59
CSMD2Q7Z408 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CSMD2Q7Z408 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CSMD2Q7Z408 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.74■□□□□ 0.59
CSMD2Q7Z408 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSMD2Q7Z408 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSMD2Q7Z408 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CSMD2Q7Z408 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.74■□□□□ 0.59
CSMD2Q7Z408 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.74■□□□□ 0.59
CSMD2Q7Z408 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.74■□□□□ 0.59
CSMD2Q7Z408 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.74■□□□□ 0.59
CSMD2Q7Z408 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSMD2Q7Z408 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms