Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
RNF44Q7L0R7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
RNF44Q7L0R7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RNF44Q7L0R7 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF44Q7L0R7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF44Q7L0R7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF44Q7L0R7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF44Q7L0R7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
RNF44Q7L0R7 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF44Q7L0R7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF44Q7L0R7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
RNF44Q7L0R7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF44Q7L0R7 AC105265.2-201ENST00000467189 838 ntBASIC21.05■□□□□ 0.96
RNF44Q7L0R7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF44Q7L0R7 AC126544.1-201ENST00000580842 1059 ntBASIC21.05■□□□□ 0.96
RNF44Q7L0R7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
RNF44Q7L0R7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF44Q7L0R7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RNF44Q7L0R7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF44Q7L0R7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
RNF44Q7L0R7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
RNF44Q7L0R7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF44Q7L0R7 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.04■□□□□ 0.96
RNF44Q7L0R7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF44Q7L0R7 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.04■□□□□ 0.96
RNF44Q7L0R7 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF44Q7L0R7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF44Q7L0R7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF44Q7L0R7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF44Q7L0R7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
RNF44Q7L0R7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF44Q7L0R7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.04■□□□□ 0.96
RNF44Q7L0R7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF44Q7L0R7 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF44Q7L0R7 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF44Q7L0R7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RNF44Q7L0R7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.04■□□□□ 0.96
RNF44Q7L0R7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF44Q7L0R7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
RNF44Q7L0R7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF44Q7L0R7 IGHV3-19-201ENST00000521488 291 ntBASIC21.03■□□□□ 0.96
RNF44Q7L0R7 AP005435.1-201ENST00000529293 1178 ntBASIC21.03■□□□□ 0.96
RNF44Q7L0R7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF44Q7L0R7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.03■□□□□ 0.96
RNF44Q7L0R7 AL031602.1-201ENST00000633169 911 ntBASIC21.03■□□□□ 0.96
RNF44Q7L0R7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF44Q7L0R7 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF44Q7L0R7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
RNF44Q7L0R7 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.03■□□□□ 0.96
RNF44Q7L0R7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF44Q7L0R7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF44Q7L0R7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.02■□□□□ 0.96
RNF44Q7L0R7 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.02■□□□□ 0.96
RNF44Q7L0R7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.02■□□□□ 0.96
RNF44Q7L0R7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF44Q7L0R7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF44Q7L0R7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
RNF44Q7L0R7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.02■□□□□ 0.96
RNF44Q7L0R7 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF44Q7L0R7 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF44Q7L0R7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF44Q7L0R7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF44Q7L0R7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF44Q7L0R7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.01■□□□□ 0.95
RNF44Q7L0R7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF44Q7L0R7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RNF44Q7L0R7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.01■□□□□ 0.95
RNF44Q7L0R7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.01■□□□□ 0.95
RNF44Q7L0R7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF44Q7L0R7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RNF44Q7L0R7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF44Q7L0R7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF44Q7L0R7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21■□□□□ 0.95
RNF44Q7L0R7 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF44Q7L0R7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF44Q7L0R7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21■□□□□ 0.95
RNF44Q7L0R7 ZNRF2P3-201ENST00000424200 374 ntBASIC21■□□□□ 0.95
RNF44Q7L0R7 AC068587.7-201ENST00000641602 218 ntBASIC21■□□□□ 0.95
RNF44Q7L0R7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21■□□□□ 0.95
RNF44Q7L0R7 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
RNF44Q7L0R7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF44Q7L0R7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF44Q7L0R7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.99■□□□□ 0.95
RNF44Q7L0R7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.99■□□□□ 0.95
RNF44Q7L0R7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF44Q7L0R7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF44Q7L0R7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF44Q7L0R7 TSPY26P-201ENST00000476365 1326 ntBASIC20.99■□□□□ 0.95
RNF44Q7L0R7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
RNF44Q7L0R7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.99■□□□□ 0.95
RNF44Q7L0R7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF44Q7L0R7 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF44Q7L0R7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.99■□□□□ 0.95
RNF44Q7L0R7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.98■□□□□ 0.95
RNF44Q7L0R7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF44Q7L0R7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RNF44Q7L0R7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF44Q7L0R7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.98■□□□□ 0.95
RNF44Q7L0R7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF44Q7L0R7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms