Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC00575Q6W349 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00575Q6W349 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00575Q6W349 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00575Q6W349 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LINC00575Q6W349 AC007029.1-201ENST00000604183 313 ntBASIC13.92□□□□□ -0.18
LINC00575Q6W349 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00575Q6W349 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00575Q6W349 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC00575Q6W349 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00575Q6W349 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00575Q6W349 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
LINC00575Q6W349 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00575Q6W349 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00575Q6W349 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
LINC00575Q6W349 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00575Q6W349 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00575Q6W349 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00575Q6W349 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00575Q6W349 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00575Q6W349 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00575Q6W349 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00575Q6W349 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00575Q6W349 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00575Q6W349 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
LINC00575Q6W349 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00575Q6W349 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00575Q6W349 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00575Q6W349 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
LINC00575Q6W349 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00575Q6W349 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00575Q6W349 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00575Q6W349 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00575Q6W349 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC13.91□□□□□ -0.18
LINC00575Q6W349 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00575Q6W349 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00575Q6W349 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
LINC00575Q6W349 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00575Q6W349 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC13.9□□□□□ -0.18
LINC00575Q6W349 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC00575Q6W349 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
LINC00575Q6W349 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00575Q6W349 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC00575Q6W349 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00575Q6W349 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
LINC00575Q6W349 GDI1-215ENST00000630693 786 ntTSL 4 BASIC13.9□□□□□ -0.18
LINC00575Q6W349 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
LINC00575Q6W349 AC244015.2-201ENST00000616358 1861 ntBASIC13.9□□□□□ -0.18
LINC00575Q6W349 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC00575Q6W349 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
LINC00575Q6W349 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00575Q6W349 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00575Q6W349 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00575Q6W349 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00575Q6W349 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00575Q6W349 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00575Q6W349 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
LINC00575Q6W349 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
LINC00575Q6W349 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00575Q6W349 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
LINC00575Q6W349 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00575Q6W349 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC00575Q6W349 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00575Q6W349 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00575Q6W349 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC00575Q6W349 MIR3648-2-201ENST00000581792 180 ntBASIC13.89□□□□□ -0.19
LINC00575Q6W349 MIR3648-1-201ENST00000615959 180 ntBASIC13.89□□□□□ -0.19
LINC00575Q6W349 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00575Q6W349 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00575Q6W349 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC13.89□□□□□ -0.19
LINC00575Q6W349 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00575Q6W349 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00575Q6W349 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00575Q6W349 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC13.89□□□□□ -0.19
LINC00575Q6W349 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC00575Q6W349 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
LINC00575Q6W349 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00575Q6W349 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00575Q6W349 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00575Q6W349 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00575Q6W349 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC13.88□□□□□ -0.19
LINC00575Q6W349 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00575Q6W349 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC13.88□□□□□ -0.19
LINC00575Q6W349 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC13.88□□□□□ -0.19
LINC00575Q6W349 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC13.88□□□□□ -0.19
LINC00575Q6W349 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00575Q6W349 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LINC00575Q6W349 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LINC00575Q6W349 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LINC00575Q6W349 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00575Q6W349 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00575Q6W349 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00575Q6W349 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC13.88□□□□□ -0.19
LINC00575Q6W349 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00575Q6W349 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00575Q6W349 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
LINC00575Q6W349 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
LINC00575Q6W349 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC00575Q6W349 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00575Q6W349 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms