Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC144NLQ6NUI1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CCDC144NLQ6NUI1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC144NLQ6NUI1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC144NLQ6NUI1 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC144NLQ6NUI1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC144NLQ6NUI1 AL355001.2-201ENST00000620617 1191 ntBASIC17.79■□□□□ 0.44
CCDC144NLQ6NUI1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CCDC144NLQ6NUI1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CCDC144NLQ6NUI1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC144NLQ6NUI1 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC144NLQ6NUI1 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC144NLQ6NUI1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
CCDC144NLQ6NUI1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC144NLQ6NUI1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC144NLQ6NUI1 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CCDC144NLQ6NUI1 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC144NLQ6NUI1 BX842568.3-201ENST00000418104 571 ntBASIC17.78■□□□□ 0.44
CCDC144NLQ6NUI1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC144NLQ6NUI1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC144NLQ6NUI1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC144NLQ6NUI1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC144NLQ6NUI1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC144NLQ6NUI1 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC144NLQ6NUI1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC144NLQ6NUI1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC144NLQ6NUI1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC144NLQ6NUI1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC144NLQ6NUI1 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC144NLQ6NUI1 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CCDC144NLQ6NUI1 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC144NLQ6NUI1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC144NLQ6NUI1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC144NLQ6NUI1 AC087239.1-201ENST00000622671 572 ntBASIC17.77■□□□□ 0.44
CCDC144NLQ6NUI1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC144NLQ6NUI1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.77■□□□□ 0.43
CCDC144NLQ6NUI1 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC144NLQ6NUI1 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC144NLQ6NUI1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC144NLQ6NUI1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC144NLQ6NUI1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC144NLQ6NUI1 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CCDC144NLQ6NUI1 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CCDC144NLQ6NUI1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
CCDC144NLQ6NUI1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.76■□□□□ 0.43
CCDC144NLQ6NUI1 AC027682.1-201ENST00000562846 899 ntBASIC17.76■□□□□ 0.43
CCDC144NLQ6NUI1 AC233992.3-201ENST00000607491 485 ntBASIC17.76■□□□□ 0.43
CCDC144NLQ6NUI1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
CCDC144NLQ6NUI1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC144NLQ6NUI1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CCDC144NLQ6NUI1 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC144NLQ6NUI1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC144NLQ6NUI1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC144NLQ6NUI1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC144NLQ6NUI1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC144NLQ6NUI1 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC144NLQ6NUI1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CCDC144NLQ6NUI1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC144NLQ6NUI1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC144NLQ6NUI1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC144NLQ6NUI1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CCDC144NLQ6NUI1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC144NLQ6NUI1 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC144NLQ6NUI1 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.75■□□□□ 0.43
CCDC144NLQ6NUI1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.75■□□□□ 0.43
CCDC144NLQ6NUI1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC144NLQ6NUI1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC144NLQ6NUI1 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC144NLQ6NUI1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC144NLQ6NUI1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC144NLQ6NUI1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC144NLQ6NUI1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC144NLQ6NUI1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.74■□□□□ 0.43
CCDC144NLQ6NUI1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC144NLQ6NUI1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC144NLQ6NUI1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC144NLQ6NUI1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC144NLQ6NUI1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC144NLQ6NUI1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC144NLQ6NUI1 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
CCDC144NLQ6NUI1 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CCDC144NLQ6NUI1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CCDC144NLQ6NUI1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC144NLQ6NUI1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC144NLQ6NUI1 PKD1P6-201ENST00000343738 4769 ntBASIC17.73■□□□□ 0.43
CCDC144NLQ6NUI1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CCDC144NLQ6NUI1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC144NLQ6NUI1 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CCDC144NLQ6NUI1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC144NLQ6NUI1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC144NLQ6NUI1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC144NLQ6NUI1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CCDC144NLQ6NUI1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC144NLQ6NUI1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CCDC144NLQ6NUI1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC144NLQ6NUI1 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC144NLQ6NUI1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
CCDC144NLQ6NUI1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC144NLQ6NUI1 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC144NLQ6NUI1 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms