Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
CDCA8Q53HL2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC30.46■■■□□ 2.47
CDCA8Q53HL2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC30.46■■■□□ 2.47
CDCA8Q53HL2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC30.46■■■□□ 2.47
CDCA8Q53HL2 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
CDCA8Q53HL2 AK1-201ENST00000223836 736 ntTSL 3 BASIC30.45■■■□□ 2.47
CDCA8Q53HL2 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC30.45■■■□□ 2.47
CDCA8Q53HL2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
CDCA8Q53HL2 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
CDCA8Q53HL2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC30.45■■■□□ 2.46
CDCA8Q53HL2 JTB-203ENST00000368589 1216 ntTSL 2 BASIC30.44■■■□□ 2.46
CDCA8Q53HL2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC30.44■■■□□ 2.46
CDCA8Q53HL2 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC30.44■■■□□ 2.46
CDCA8Q53HL2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC30.44■■■□□ 2.46
CDCA8Q53HL2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CDCA8Q53HL2 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC30.43■■■□□ 2.46
CDCA8Q53HL2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CDCA8Q53HL2 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC30.43■■■□□ 2.46
CDCA8Q53HL2 DUSP8P5-201ENST00000422884 1815 ntBASIC30.43■■■□□ 2.46
CDCA8Q53HL2 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC30.43■■■□□ 2.46
CDCA8Q53HL2 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CDCA8Q53HL2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC30.43■■■□□ 2.46
CDCA8Q53HL2 AL354811.1-201ENST00000610286 706 ntBASIC30.43■■■□□ 2.46
CDCA8Q53HL2 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC30.43■■■□□ 2.46
CDCA8Q53HL2 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC30.43■■■□□ 2.46
CDCA8Q53HL2 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC30.43■■■□□ 2.46
CDCA8Q53HL2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC30.42■■■□□ 2.46
CDCA8Q53HL2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
CDCA8Q53HL2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CDCA8Q53HL2 RARA-203ENST00000394086 2008 ntTSL 2 BASIC30.42■■■□□ 2.46
CDCA8Q53HL2 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC30.42■■■□□ 2.46
CDCA8Q53HL2 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CDCA8Q53HL2 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC30.42■■■□□ 2.46
CDCA8Q53HL2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC30.42■■■□□ 2.46
CDCA8Q53HL2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC30.42■■■□□ 2.46
CDCA8Q53HL2 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
CDCA8Q53HL2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CDCA8Q53HL2 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CDCA8Q53HL2 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CDCA8Q53HL2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC30.41■■■□□ 2.46
CDCA8Q53HL2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CDCA8Q53HL2 NME4-202ENST00000382940 766 ntTSL 3 BASIC30.41■■■□□ 2.46
CDCA8Q53HL2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC30.41■■■□□ 2.46
CDCA8Q53HL2 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CDCA8Q53HL2 RARRES2P6-201ENST00000567333 442 ntBASIC30.41■■■□□ 2.46
CDCA8Q53HL2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC30.41■■■□□ 2.46
CDCA8Q53HL2 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC30.41■■■□□ 2.46
CDCA8Q53HL2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC30.41■■■□□ 2.46
CDCA8Q53HL2 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CDCA8Q53HL2 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC30.4■■■□□ 2.46
CDCA8Q53HL2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC30.4■■■□□ 2.46
CDCA8Q53HL2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC30.4■■■□□ 2.46
CDCA8Q53HL2 AC012414.1-201ENST00000556676 535 ntBASIC30.4■■■□□ 2.46
CDCA8Q53HL2 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CDCA8Q53HL2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC30.39■■■□□ 2.46
CDCA8Q53HL2 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC30.39■■■□□ 2.46
CDCA8Q53HL2 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
CDCA8Q53HL2 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CDCA8Q53HL2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC30.39■■■□□ 2.46
CDCA8Q53HL2 OXCT2P1-201ENST00000447263 1535 ntBASIC30.39■■■□□ 2.46
CDCA8Q53HL2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC30.39■■■□□ 2.46
CDCA8Q53HL2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC30.39■■■□□ 2.46
CDCA8Q53HL2 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CDCA8Q53HL2 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC30.39■■■□□ 2.45
CDCA8Q53HL2 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC30.39■■■□□ 2.45
CDCA8Q53HL2 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
CDCA8Q53HL2 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CDCA8Q53HL2 LINC01960-201ENST00000563759 1884 ntBASIC30.38■■■□□ 2.45
CDCA8Q53HL2 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CDCA8Q53HL2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC30.38■■■□□ 2.45
CDCA8Q53HL2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC30.38■■■□□ 2.45
CDCA8Q53HL2 AC026271.2-201ENST00000428091 497 ntBASIC30.38■■■□□ 2.45
CDCA8Q53HL2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
CDCA8Q53HL2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
CDCA8Q53HL2 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC30.38■■■□□ 2.45
CDCA8Q53HL2 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
CDCA8Q53HL2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CDCA8Q53HL2 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
CDCA8Q53HL2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC30.37■■■□□ 2.45
CDCA8Q53HL2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CDCA8Q53HL2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
CDCA8Q53HL2 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC30.37■■■□□ 2.45
CDCA8Q53HL2 AC105233.4-201ENST00000642045 216 ntBASIC30.37■■■□□ 2.45
CDCA8Q53HL2 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CDCA8Q53HL2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CDCA8Q53HL2 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
CDCA8Q53HL2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC30.37■■■□□ 2.45
CDCA8Q53HL2 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CDCA8Q53HL2 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CDCA8Q53HL2 AC027612.3-201ENST00000413684 1047 ntBASIC30.36■■■□□ 2.45
CDCA8Q53HL2 AC097381.1-201ENST00000429019 1296 ntBASIC30.36■■■□□ 2.45
CDCA8Q53HL2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC30.36■■■□□ 2.45
CDCA8Q53HL2 MIR6821-201ENST00000617625 74 ntBASIC30.36■■■□□ 2.45
CDCA8Q53HL2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC30.36■■■□□ 2.45
CDCA8Q53HL2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC30.36■■■□□ 2.45
CDCA8Q53HL2 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
CDCA8Q53HL2 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC30.35■■■□□ 2.45
CDCA8Q53HL2 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC30.35■■■□□ 2.45
CDCA8Q53HL2 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CDCA8Q53HL2 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC30.35■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms