Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01554Q52M75 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC01554Q52M75 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01554Q52M75 LTB4R2-202ENST00000528054 3092 ntBASIC11□□□□□ -0.65
LINC01554Q52M75 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01554Q52M75 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC11□□□□□ -0.65
LINC01554Q52M75 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC11□□□□□ -0.65
LINC01554Q52M75 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
LINC01554Q52M75 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01554Q52M75 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01554Q52M75 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01554Q52M75 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01554Q52M75 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01554Q52M75 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01554Q52M75 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC10.99□□□□□ -0.65
LINC01554Q52M75 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01554Q52M75 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
LINC01554Q52M75 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01554Q52M75 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01554Q52M75 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01554Q52M75 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC01554Q52M75 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01554Q52M75 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01554Q52M75 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01554Q52M75 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01554Q52M75 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC01554Q52M75 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01554Q52M75 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01554Q52M75 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01554Q52M75 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01554Q52M75 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01554Q52M75 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC10.98□□□□□ -0.65
LINC01554Q52M75 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01554Q52M75 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01554Q52M75 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01554Q52M75 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01554Q52M75 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01554Q52M75 BOD1-206ENST00000480951 814 ntTSL 2 BASIC10.98□□□□□ -0.65
LINC01554Q52M75 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC10.98□□□□□ -0.65
LINC01554Q52M75 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC10.98□□□□□ -0.65
LINC01554Q52M75 AP006261.1-201ENST00000584783 668 ntBASIC10.98□□□□□ -0.65
LINC01554Q52M75 AC044849.2-201ENST00000606596 710 ntBASIC10.98□□□□□ -0.65
LINC01554Q52M75 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01554Q52M75 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
LINC01554Q52M75 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC10.98□□□□□ -0.65
LINC01554Q52M75 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01554Q52M75 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
LINC01554Q52M75 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01554Q52M75 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01554Q52M75 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01554Q52M75 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01554Q52M75 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01554Q52M75 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01554Q52M75 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01554Q52M75 AL139125.2-201ENST00000623134 1869 ntBASIC10.98□□□□□ -0.65
LINC01554Q52M75 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01554Q52M75 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01554Q52M75 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01554Q52M75 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01554Q52M75 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01554Q52M75 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01554Q52M75 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01554Q52M75 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01554Q52M75 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
LINC01554Q52M75 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01554Q52M75 AC127496.7-201ENST00000625110 1798 ntBASIC10.97□□□□□ -0.65
LINC01554Q52M75 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01554Q52M75 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
LINC01554Q52M75 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC01554Q52M75 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01554Q52M75 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01554Q52M75 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01554Q52M75 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01554Q52M75 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01554Q52M75 NOC2LP1-202ENST00000452600 2235 ntBASIC10.96□□□□□ -0.65
LINC01554Q52M75 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01554Q52M75 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01554Q52M75 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01554Q52M75 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
LINC01554Q52M75 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01554Q52M75 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01554Q52M75 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01554Q52M75 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
LINC01554Q52M75 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01554Q52M75 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
LINC01554Q52M75 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01554Q52M75 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
LINC01554Q52M75 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01554Q52M75 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01554Q52M75 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01554Q52M75 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01554Q52M75 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC10.96□□□□□ -0.66
LINC01554Q52M75 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01554Q52M75 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01554Q52M75 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01554Q52M75 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01554Q52M75 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01554Q52M75 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01554Q52M75 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01554Q52M75 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms