Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.2■■□□□ 1.3
PTPN20Q4JDL3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.2■■□□□ 1.3
PTPN20Q4JDL3 AC011298.3-201ENST00000615796 283 ntBASIC23.2■■□□□ 1.3
PTPN20Q4JDL3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PTPN20Q4JDL3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.2■■□□□ 1.3
PTPN20Q4JDL3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PTPN20Q4JDL3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PTPN20Q4JDL3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PTPN20Q4JDL3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.19■■□□□ 1.3
PTPN20Q4JDL3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
PTPN20Q4JDL3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PTPN20Q4JDL3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PTPN20Q4JDL3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PTPN20Q4JDL3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PTPN20Q4JDL3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.19■■□□□ 1.3
PTPN20Q4JDL3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PTPN20Q4JDL3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.19■■□□□ 1.3
PTPN20Q4JDL3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.19■■□□□ 1.3
PTPN20Q4JDL3 AC136469.2-201ENST00000623944 1028 ntBASIC23.19■■□□□ 1.3
PTPN20Q4JDL3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
PTPN20Q4JDL3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PTPN20Q4JDL3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PTPN20Q4JDL3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.19■■□□□ 1.3
PTPN20Q4JDL3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PTPN20Q4JDL3 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PTPN20Q4JDL3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PTPN20Q4JDL3 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.19■■□□□ 1.3
PTPN20Q4JDL3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PTPN20Q4JDL3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PTPN20Q4JDL3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
PTPN20Q4JDL3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.18■■□□□ 1.3
PTPN20Q4JDL3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PTPN20Q4JDL3 UNC93B3-201ENST00000308076 687 ntBASIC23.18■■□□□ 1.3
PTPN20Q4JDL3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
PTPN20Q4JDL3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PTPN20Q4JDL3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
PTPN20Q4JDL3 AC127496.7-201ENST00000625110 1798 ntBASIC23.18■■□□□ 1.3
PTPN20Q4JDL3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PTPN20Q4JDL3 GUSBP5-202ENST00000510805 1989 ntBASIC23.18■■□□□ 1.3
PTPN20Q4JDL3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
PTPN20Q4JDL3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.17■■□□□ 1.3
PTPN20Q4JDL3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
PTPN20Q4JDL3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PTPN20Q4JDL3 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PTPN20Q4JDL3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PTPN20Q4JDL3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.17■■□□□ 1.3
PTPN20Q4JDL3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.17■■□□□ 1.3
PTPN20Q4JDL3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PTPN20Q4JDL3 OR2I1P-207ENST00000453522 948 ntBASIC23.17■■□□□ 1.3
PTPN20Q4JDL3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
PTPN20Q4JDL3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
PTPN20Q4JDL3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
PTPN20Q4JDL3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PTPN20Q4JDL3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PTPN20Q4JDL3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PTPN20Q4JDL3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PTPN20Q4JDL3 AL117328.2-201ENST00000624617 1940 ntBASIC23.16■■□□□ 1.3
PTPN20Q4JDL3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PTPN20Q4JDL3 AC010525.1-201ENST00000585559 441 ntBASIC23.16■■□□□ 1.3
PTPN20Q4JDL3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PTPN20Q4JDL3 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PTPN20Q4JDL3 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PTPN20Q4JDL3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
PTPN20Q4JDL3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
PTPN20Q4JDL3 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PTPN20Q4JDL3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PTPN20Q4JDL3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
PTPN20Q4JDL3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PTPN20Q4JDL3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
PTPN20Q4JDL3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PTPN20Q4JDL3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.15■■□□□ 1.3
PTPN20Q4JDL3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.15■■□□□ 1.3
PTPN20Q4JDL3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PTPN20Q4JDL3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.15■■□□□ 1.3
PTPN20Q4JDL3 AL031602.1-201ENST00000633169 911 ntBASIC23.15■■□□□ 1.3
PTPN20Q4JDL3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
PTPN20Q4JDL3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PTPN20Q4JDL3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PTPN20Q4JDL3 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.14■■□□□ 1.3
PTPN20Q4JDL3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
PTPN20Q4JDL3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
PTPN20Q4JDL3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PTPN20Q4JDL3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
PTPN20Q4JDL3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.14■■□□□ 1.29
PTPN20Q4JDL3 AC096631.2-201ENST00000436136 790 ntBASIC23.14■■□□□ 1.29
PTPN20Q4JDL3 AC024257.2-201ENST00000549699 147 ntBASIC23.14■■□□□ 1.29
PTPN20Q4JDL3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PTPN20Q4JDL3 AC080038.3-201ENST00000623346 1952 ntBASIC23.14■■□□□ 1.29
PTPN20Q4JDL3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.13■■□□□ 1.29
PTPN20Q4JDL3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PTPN20Q4JDL3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PTPN20Q4JDL3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PTPN20Q4JDL3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
PTPN20Q4JDL3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.13■■□□□ 1.29
PTPN20Q4JDL3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.13■■□□□ 1.29
PTPN20Q4JDL3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PTPN20Q4JDL3 AL136162.1-201ENST00000607711 1078 ntBASIC23.13■■□□□ 1.29
PTPN20Q4JDL3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PTPN20Q4JDL3 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
PTPN20Q4JDL3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms