Protein–RNA interactions for Protein: Q3BBV0

NBPF1, Neuroblastoma breakpoint family member 1, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF1Q3BBV0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
NBPF1Q3BBV0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC31.19■■■□□ 2.58
NBPF1Q3BBV0 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC31.19■■■□□ 2.58
NBPF1Q3BBV0 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
NBPF1Q3BBV0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
NBPF1Q3BBV0 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
NBPF1Q3BBV0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC31.18■■■□□ 2.58
NBPF1Q3BBV0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC31.18■■■□□ 2.58
NBPF1Q3BBV0 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC31.18■■■□□ 2.58
NBPF1Q3BBV0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
NBPF1Q3BBV0 AC104564.3-201ENST00000582367 638 ntBASIC31.18■■■□□ 2.58
NBPF1Q3BBV0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC31.18■■■□□ 2.58
NBPF1Q3BBV0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
NBPF1Q3BBV0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC31.18■■■□□ 2.58
NBPF1Q3BBV0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
NBPF1Q3BBV0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC31.17■■■□□ 2.58
NBPF1Q3BBV0 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
NBPF1Q3BBV0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
NBPF1Q3BBV0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC31.17■■■□□ 2.58
NBPF1Q3BBV0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC31.17■■■□□ 2.58
NBPF1Q3BBV0 AC105233.4-201ENST00000642045 216 ntBASIC31.17■■■□□ 2.58
NBPF1Q3BBV0 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
NBPF1Q3BBV0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
NBPF1Q3BBV0 DUSP8P3-201ENST00000399571 1760 ntBASIC31.17■■■□□ 2.58
NBPF1Q3BBV0 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC31.16■■■□□ 2.58
NBPF1Q3BBV0 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC31.16■■■□□ 2.58
NBPF1Q3BBV0 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC31.16■■■□□ 2.58
NBPF1Q3BBV0 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
NBPF1Q3BBV0 AC123595.1-201ENST00000440769 1046 ntBASIC31.16■■■□□ 2.58
NBPF1Q3BBV0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC31.16■■■□□ 2.58
NBPF1Q3BBV0 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC31.16■■■□□ 2.58
NBPF1Q3BBV0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
NBPF1Q3BBV0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC31.15■■■□□ 2.58
NBPF1Q3BBV0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC31.15■■■□□ 2.58
NBPF1Q3BBV0 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
NBPF1Q3BBV0 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
NBPF1Q3BBV0 CCDC92B-201ENST00000575506 885 ntBASIC31.15■■■□□ 2.58
NBPF1Q3BBV0 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC31.15■■■□□ 2.58
NBPF1Q3BBV0 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
NBPF1Q3BBV0 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
NBPF1Q3BBV0 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
NBPF1Q3BBV0 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
NBPF1Q3BBV0 AC034268.1-201ENST00000441047 882 ntBASIC31.14■■■□□ 2.58
NBPF1Q3BBV0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC31.14■■■□□ 2.58
NBPF1Q3BBV0 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC31.14■■■□□ 2.58
NBPF1Q3BBV0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
NBPF1Q3BBV0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
NBPF1Q3BBV0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
NBPF1Q3BBV0 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
NBPF1Q3BBV0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC31.14■■■□□ 2.58
NBPF1Q3BBV0 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC31.13■■■□□ 2.57
NBPF1Q3BBV0 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
NBPF1Q3BBV0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
NBPF1Q3BBV0 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC31.13■■■□□ 2.57
NBPF1Q3BBV0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC31.13■■■□□ 2.57
NBPF1Q3BBV0 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
NBPF1Q3BBV0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
NBPF1Q3BBV0 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC31.13■■■□□ 2.57
NBPF1Q3BBV0 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
NBPF1Q3BBV0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
NBPF1Q3BBV0 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
NBPF1Q3BBV0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC31.13■■■□□ 2.57
NBPF1Q3BBV0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
NBPF1Q3BBV0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC31.13■■■□□ 2.57
NBPF1Q3BBV0 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
NBPF1Q3BBV0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC31.12■■■□□ 2.57
NBPF1Q3BBV0 KRT18P5-201ENST00000436075 1291 ntBASIC31.12■■■□□ 2.57
NBPF1Q3BBV0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
NBPF1Q3BBV0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC31.12■■■□□ 2.57
NBPF1Q3BBV0 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
NBPF1Q3BBV0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC31.12■■■□□ 2.57
NBPF1Q3BBV0 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
NBPF1Q3BBV0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
NBPF1Q3BBV0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC31.11■■■□□ 2.57
NBPF1Q3BBV0 NT5C3AP1-201ENST00000394500 1012 ntBASIC31.11■■■□□ 2.57
NBPF1Q3BBV0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC31.11■■■□□ 2.57
NBPF1Q3BBV0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC31.1■■■□□ 2.57
NBPF1Q3BBV0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
NBPF1Q3BBV0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC31.1■■■□□ 2.57
NBPF1Q3BBV0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC31.1■■■□□ 2.57
NBPF1Q3BBV0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC31.1■■■□□ 2.57
NBPF1Q3BBV0 PARL-206ENST00000435888 1098 ntTSL 5 BASIC31.1■■■□□ 2.57
NBPF1Q3BBV0 TERF1P2-201ENST00000583350 1212 ntBASIC31.1■■■□□ 2.57
NBPF1Q3BBV0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC31.1■■■□□ 2.57
NBPF1Q3BBV0 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
NBPF1Q3BBV0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
NBPF1Q3BBV0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC31.09■■■□□ 2.57
NBPF1Q3BBV0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
NBPF1Q3BBV0 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
NBPF1Q3BBV0 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
NBPF1Q3BBV0 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
NBPF1Q3BBV0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
NBPF1Q3BBV0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC31.09■■■□□ 2.57
NBPF1Q3BBV0 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC31.09■■■□□ 2.57
NBPF1Q3BBV0 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
NBPF1Q3BBV0 THRA-202ENST00000394121 2260 ntTSL 2 BASIC31.09■■■□□ 2.57
NBPF1Q3BBV0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC31.09■■■□□ 2.57
NBPF1Q3BBV0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC31.09■■■□□ 2.57
NBPF1Q3BBV0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC31.08■■■□□ 2.57
NBPF1Q3BBV0 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms