Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 ANOS2P-203ENST00000472227 1816 ntBASIC18.79■□□□□ 0.6
EFNB3Q15768 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EFNB3Q15768 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EFNB3Q15768 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
EFNB3Q15768 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
EFNB3Q15768 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EFNB3Q15768 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EFNB3Q15768 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.78■□□□□ 0.6
EFNB3Q15768 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.78■□□□□ 0.6
EFNB3Q15768 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
EFNB3Q15768 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
EFNB3Q15768 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
EFNB3Q15768 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
EFNB3Q15768 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
EFNB3Q15768 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.77■□□□□ 0.6
EFNB3Q15768 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.77■□□□□ 0.6
EFNB3Q15768 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.77■□□□□ 0.6
EFNB3Q15768 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.77■□□□□ 0.6
EFNB3Q15768 AL031602.1-201ENST00000633169 911 ntBASIC18.77■□□□□ 0.6
EFNB3Q15768 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
EFNB3Q15768 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
EFNB3Q15768 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
EFNB3Q15768 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
EFNB3Q15768 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
EFNB3Q15768 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.77■□□□□ 0.59
EFNB3Q15768 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
EFNB3Q15768 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
EFNB3Q15768 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
EFNB3Q15768 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
EFNB3Q15768 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.76■□□□□ 0.59
EFNB3Q15768 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.76■□□□□ 0.59
EFNB3Q15768 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EFNB3Q15768 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
EFNB3Q15768 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
EFNB3Q15768 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
EFNB3Q15768 AC123595.1-201ENST00000440769 1046 ntBASIC18.76■□□□□ 0.59
EFNB3Q15768 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.76■□□□□ 0.59
EFNB3Q15768 AC087239.1-201ENST00000622671 572 ntBASIC18.76■□□□□ 0.59
EFNB3Q15768 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EFNB3Q15768 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.75■□□□□ 0.59
EFNB3Q15768 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.75■□□□□ 0.59
EFNB3Q15768 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.75■□□□□ 0.59
EFNB3Q15768 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EFNB3Q15768 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EFNB3Q15768 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
EFNB3Q15768 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.75■□□□□ 0.59
EFNB3Q15768 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.75■□□□□ 0.59
EFNB3Q15768 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
EFNB3Q15768 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
EFNB3Q15768 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EFNB3Q15768 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EFNB3Q15768 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.75■□□□□ 0.59
EFNB3Q15768 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.75■□□□□ 0.59
EFNB3Q15768 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.75■□□□□ 0.59
EFNB3Q15768 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
EFNB3Q15768 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
EFNB3Q15768 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EFNB3Q15768 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.74■□□□□ 0.59
EFNB3Q15768 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EFNB3Q15768 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EFNB3Q15768 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EFNB3Q15768 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.74■□□□□ 0.59
EFNB3Q15768 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EFNB3Q15768 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.74■□□□□ 0.59
EFNB3Q15768 AC105233.4-201ENST00000642045 216 ntBASIC18.74■□□□□ 0.59
EFNB3Q15768 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
EFNB3Q15768 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
EFNB3Q15768 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
EFNB3Q15768 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
EFNB3Q15768 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EFNB3Q15768 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.74■□□□□ 0.59
EFNB3Q15768 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EFNB3Q15768 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.74■□□□□ 0.59
EFNB3Q15768 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EFNB3Q15768 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.73■□□□□ 0.59
EFNB3Q15768 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
EFNB3Q15768 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
EFNB3Q15768 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
EFNB3Q15768 AC104564.3-201ENST00000582367 638 ntBASIC18.73■□□□□ 0.59
EFNB3Q15768 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
EFNB3Q15768 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.73■□□□□ 0.59
EFNB3Q15768 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
EFNB3Q15768 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
EFNB3Q15768 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
EFNB3Q15768 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.73■□□□□ 0.59
EFNB3Q15768 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
EFNB3Q15768 AC133561.1-201ENST00000568600 2415 ntBASIC18.72■□□□□ 0.59
EFNB3Q15768 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.72■□□□□ 0.59
EFNB3Q15768 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
EFNB3Q15768 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.72■□□□□ 0.59
EFNB3Q15768 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.72■□□□□ 0.59
EFNB3Q15768 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.72■□□□□ 0.59
EFNB3Q15768 AC010141.3-201ENST00000456659 717 ntBASIC18.72■□□□□ 0.59
EFNB3Q15768 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.72■□□□□ 0.59
EFNB3Q15768 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
EFNB3Q15768 MIR6084-201ENST00000622012 110 ntBASIC18.72■□□□□ 0.59
EFNB3Q15768 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.72■□□□□ 0.59
EFNB3Q15768 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EFNB3Q15768 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
EFNB3Q15768 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms