Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
EFNB1P98172 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
EFNB1P98172 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
EFNB1P98172 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
EFNB1P98172 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EFNB1P98172 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
EFNB1P98172 MIR6722-201ENST00000617286 78 ntBASIC19.73■□□□□ 0.75
EFNB1P98172 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EFNB1P98172 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
EFNB1P98172 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EFNB1P98172 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.72■□□□□ 0.75
EFNB1P98172 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.72■□□□□ 0.75
EFNB1P98172 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EFNB1P98172 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
EFNB1P98172 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
EFNB1P98172 AC137630.3-201ENST00000607245 391 ntBASIC19.72■□□□□ 0.75
EFNB1P98172 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
EFNB1P98172 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.72■□□□□ 0.75
EFNB1P98172 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
EFNB1P98172 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
EFNB1P98172 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
EFNB1P98172 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.72■□□□□ 0.75
EFNB1P98172 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EFNB1P98172 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
EFNB1P98172 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
EFNB1P98172 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.71■□□□□ 0.75
EFNB1P98172 AC244015.2-201ENST00000616358 1861 ntBASIC19.71■□□□□ 0.75
EFNB1P98172 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.71■□□□□ 0.75
EFNB1P98172 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
EFNB1P98172 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EFNB1P98172 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
EFNB1P98172 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EFNB1P98172 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.71■□□□□ 0.75
EFNB1P98172 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EFNB1P98172 AC103834.1-201ENST00000520383 144 ntBASIC19.71■□□□□ 0.75
EFNB1P98172 AC009086.3-201ENST00000623486 1008 ntBASIC19.71■□□□□ 0.75
EFNB1P98172 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.71■□□□□ 0.75
EFNB1P98172 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
EFNB1P98172 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
EFNB1P98172 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EFNB1P98172 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EFNB1P98172 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EFNB1P98172 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EFNB1P98172 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EFNB1P98172 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EFNB1P98172 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.7■□□□□ 0.74
EFNB1P98172 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.7■□□□□ 0.74
EFNB1P98172 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EFNB1P98172 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
EFNB1P98172 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EFNB1P98172 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EFNB1P98172 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
EFNB1P98172 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EFNB1P98172 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EFNB1P98172 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EFNB1P98172 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
EFNB1P98172 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EFNB1P98172 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EFNB1P98172 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EFNB1P98172 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
EFNB1P98172 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
EFNB1P98172 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.69■□□□□ 0.74
EFNB1P98172 AC005229.4-201ENST00000610085 2198 ntBASIC19.69■□□□□ 0.74
EFNB1P98172 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EFNB1P98172 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
EFNB1P98172 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
EFNB1P98172 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EFNB1P98172 TSPY13P-201ENST00000338964 914 ntBASIC19.69■□□□□ 0.74
EFNB1P98172 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.69■□□□□ 0.74
EFNB1P98172 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
EFNB1P98172 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.69■□□□□ 0.74
EFNB1P98172 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.69■□□□□ 0.74
EFNB1P98172 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EFNB1P98172 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.69■□□□□ 0.74
EFNB1P98172 AC005703.6-201ENST00000623265 1329 ntBASIC19.69■□□□□ 0.74
EFNB1P98172 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
EFNB1P98172 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
EFNB1P98172 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EFNB1P98172 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
EFNB1P98172 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
EFNB1P98172 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
EFNB1P98172 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
EFNB1P98172 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EFNB1P98172 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
EFNB1P98172 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
EFNB1P98172 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
EFNB1P98172 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
EFNB1P98172 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
EFNB1P98172 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
EFNB1P98172 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
EFNB1P98172 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EFNB1P98172 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
EFNB1P98172 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.67■□□□□ 0.74
EFNB1P98172 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
EFNB1P98172 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EFNB1P98172 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
EFNB1P98172 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.67■□□□□ 0.74
EFNB1P98172 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.67■□□□□ 0.74
EFNB1P98172 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
EFNB1P98172 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms