Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RPS4XP62701 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPS4XP62701 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.88■□□□□ 0.77
RPS4XP62701 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RPS4XP62701 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
RPS4XP62701 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RPS4XP62701 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPS4XP62701 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.87■□□□□ 0.77
RPS4XP62701 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPS4XP62701 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPS4XP62701 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
RPS4XP62701 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPS4XP62701 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPS4XP62701 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
RPS4XP62701 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RPS4XP62701 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.87■□□□□ 0.77
RPS4XP62701 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.87■□□□□ 0.77
RPS4XP62701 AC005837.3-201ENST00000612163 286 ntBASIC19.87■□□□□ 0.77
RPS4XP62701 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPS4XP62701 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.87■□□□□ 0.77
RPS4XP62701 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.87■□□□□ 0.77
RPS4XP62701 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RPS4XP62701 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPS4XP62701 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RPS4XP62701 AC080038.3-201ENST00000623346 1952 ntBASIC19.86■□□□□ 0.77
RPS4XP62701 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPS4XP62701 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.86■□□□□ 0.77
RPS4XP62701 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.86■□□□□ 0.77
RPS4XP62701 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RPS4XP62701 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPS4XP62701 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RPS4XP62701 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RPS4XP62701 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPS4XP62701 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPS4XP62701 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPS4XP62701 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
RPS4XP62701 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.86■□□□□ 0.77
RPS4XP62701 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPS4XP62701 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
RPS4XP62701 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.85■□□□□ 0.77
RPS4XP62701 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPS4XP62701 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPS4XP62701 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPS4XP62701 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPS4XP62701 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
RPS4XP62701 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPS4XP62701 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPS4XP62701 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RPS4XP62701 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.85■□□□□ 0.77
RPS4XP62701 AC133561.4-201ENST00000566112 224 ntBASIC19.85■□□□□ 0.77
RPS4XP62701 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RPS4XP62701 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPS4XP62701 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPS4XP62701 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RPS4XP62701 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RPS4XP62701 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPS4XP62701 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RPS4XP62701 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RPS4XP62701 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPS4XP62701 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPS4XP62701 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.84■□□□□ 0.77
RPS4XP62701 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPS4XP62701 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPS4XP62701 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.84■□□□□ 0.77
RPS4XP62701 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPS4XP62701 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPS4XP62701 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
RPS4XP62701 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPS4XP62701 LINC01960-201ENST00000563759 1884 ntBASIC19.84■□□□□ 0.77
RPS4XP62701 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPS4XP62701 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPS4XP62701 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPS4XP62701 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.83■□□□□ 0.77
RPS4XP62701 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPS4XP62701 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPS4XP62701 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RPS4XP62701 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.83■□□□□ 0.77
RPS4XP62701 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RPS4XP62701 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.83■□□□□ 0.77
RPS4XP62701 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RPS4XP62701 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
RPS4XP62701 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RPS4XP62701 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RPS4XP62701 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPS4XP62701 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.82■□□□□ 0.76
RPS4XP62701 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RPS4XP62701 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPS4XP62701 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RPS4XP62701 AC092053.2-201ENST00000640557 1818 ntBASIC19.82■□□□□ 0.76
RPS4XP62701 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPS4XP62701 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.82■□□□□ 0.76
RPS4XP62701 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.82■□□□□ 0.76
RPS4XP62701 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.82■□□□□ 0.76
RPS4XP62701 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.82■□□□□ 0.76
RPS4XP62701 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
RPS4XP62701 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPS4XP62701 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
RPS4XP62701 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RPS4XP62701 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPS4XP62701 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms