Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SEC61A1P61619 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SEC61A1P61619 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SEC61A1P61619 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.1■□□□□ 0.65
SEC61A1P61619 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SEC61A1P61619 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SEC61A1P61619 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SEC61A1P61619 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SEC61A1P61619 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
SEC61A1P61619 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.1■□□□□ 0.65
SEC61A1P61619 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.1■□□□□ 0.65
SEC61A1P61619 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.1■□□□□ 0.65
SEC61A1P61619 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SEC61A1P61619 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SEC61A1P61619 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SEC61A1P61619 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SEC61A1P61619 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SEC61A1P61619 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SEC61A1P61619 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.09■□□□□ 0.65
SEC61A1P61619 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.09■□□□□ 0.65
SEC61A1P61619 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.09■□□□□ 0.65
SEC61A1P61619 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SEC61A1P61619 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SEC61A1P61619 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
SEC61A1P61619 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SEC61A1P61619 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.09■□□□□ 0.65
SEC61A1P61619 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SEC61A1P61619 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SEC61A1P61619 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SEC61A1P61619 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.08■□□□□ 0.65
SEC61A1P61619 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SEC61A1P61619 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SEC61A1P61619 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.08■□□□□ 0.65
SEC61A1P61619 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
SEC61A1P61619 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
SEC61A1P61619 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.08■□□□□ 0.64
SEC61A1P61619 MIR4466-201ENST00000606121 54 ntBASIC19.08■□□□□ 0.64
SEC61A1P61619 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SEC61A1P61619 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SEC61A1P61619 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SEC61A1P61619 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SEC61A1P61619 AL022069.1-201ENST00000568025 1636 ntBASIC19.07■□□□□ 0.64
SEC61A1P61619 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SEC61A1P61619 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SEC61A1P61619 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SEC61A1P61619 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SEC61A1P61619 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.07■□□□□ 0.64
SEC61A1P61619 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SEC61A1P61619 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SEC61A1P61619 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SEC61A1P61619 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SEC61A1P61619 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SEC61A1P61619 AL136116.3-201ENST00000402907 1138 ntBASIC19.07■□□□□ 0.64
SEC61A1P61619 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.07■□□□□ 0.64
SEC61A1P61619 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.07■□□□□ 0.64
SEC61A1P61619 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SEC61A1P61619 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SEC61A1P61619 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SEC61A1P61619 AL512631.2-201ENST00000604634 923 ntBASIC19.07■□□□□ 0.64
SEC61A1P61619 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.07■□□□□ 0.64
SEC61A1P61619 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SEC61A1P61619 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SEC61A1P61619 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SEC61A1P61619 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SEC61A1P61619 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SEC61A1P61619 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
SEC61A1P61619 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SEC61A1P61619 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SEC61A1P61619 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.06■□□□□ 0.64
SEC61A1P61619 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SEC61A1P61619 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
SEC61A1P61619 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.06■□□□□ 0.64
SEC61A1P61619 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SEC61A1P61619 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SEC61A1P61619 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SEC61A1P61619 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.06■□□□□ 0.64
SEC61A1P61619 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
SEC61A1P61619 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SEC61A1P61619 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SEC61A1P61619 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SEC61A1P61619 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SEC61A1P61619 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SEC61A1P61619 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SEC61A1P61619 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.05■□□□□ 0.64
SEC61A1P61619 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SEC61A1P61619 ANOS2P-203ENST00000472227 1816 ntBASIC19.05■□□□□ 0.64
SEC61A1P61619 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.05■□□□□ 0.64
SEC61A1P61619 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.05■□□□□ 0.64
SEC61A1P61619 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
SEC61A1P61619 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.05■□□□□ 0.64
SEC61A1P61619 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SEC61A1P61619 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.05■□□□□ 0.64
SEC61A1P61619 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SEC61A1P61619 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SEC61A1P61619 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SEC61A1P61619 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SEC61A1P61619 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SEC61A1P61619 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SEC61A1P61619 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SEC61A1P61619 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms