Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.8■□□□□ 0.44
SPCS3P61009 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SPCS3P61009 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPCS3P61009 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.8■□□□□ 0.44
SPCS3P61009 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SPCS3P61009 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC17.8■□□□□ 0.44
SPCS3P61009 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC17.8■□□□□ 0.44
SPCS3P61009 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SPCS3P61009 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPCS3P61009 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.8■□□□□ 0.44
SPCS3P61009 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPCS3P61009 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPCS3P61009 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPCS3P61009 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPCS3P61009 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.79■□□□□ 0.44
SPCS3P61009 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
SPCS3P61009 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SPCS3P61009 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.79■□□□□ 0.44
SPCS3P61009 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SPCS3P61009 PVT1_1.1-201ENST00000615125 194 ntBASIC17.79■□□□□ 0.44
SPCS3P61009 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPCS3P61009 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SPCS3P61009 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SPCS3P61009 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPCS3P61009 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPCS3P61009 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPCS3P61009 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.79■□□□□ 0.44
SPCS3P61009 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPCS3P61009 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SPCS3P61009 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPCS3P61009 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPCS3P61009 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.78■□□□□ 0.44
SPCS3P61009 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SPCS3P61009 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPCS3P61009 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SPCS3P61009 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPCS3P61009 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPCS3P61009 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPCS3P61009 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPCS3P61009 ATP5G2P3-201ENST00000429083 425 ntBASIC17.78■□□□□ 0.44
SPCS3P61009 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC17.78■□□□□ 0.44
SPCS3P61009 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SPCS3P61009 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
SPCS3P61009 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPCS3P61009 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.78■□□□□ 0.44
SPCS3P61009 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
SPCS3P61009 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPCS3P61009 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SPCS3P61009 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SPCS3P61009 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SPCS3P61009 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SPCS3P61009 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SPCS3P61009 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SPCS3P61009 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.77■□□□□ 0.44
SPCS3P61009 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC17.77■□□□□ 0.44
SPCS3P61009 AC004987.1-201ENST00000428627 508 ntBASIC17.77■□□□□ 0.44
SPCS3P61009 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
SPCS3P61009 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SPCS3P61009 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
SPCS3P61009 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPCS3P61009 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.76■□□□□ 0.43
SPCS3P61009 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPCS3P61009 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPCS3P61009 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPCS3P61009 AC087742.1-201ENST00000575880 1738 ntBASIC17.76■□□□□ 0.43
SPCS3P61009 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SPCS3P61009 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.76■□□□□ 0.43
SPCS3P61009 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC17.76■□□□□ 0.43
SPCS3P61009 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC17.76■□□□□ 0.43
SPCS3P61009 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SPCS3P61009 BRD4-212ENST00000630599 726 ntTSL 2 BASIC17.76■□□□□ 0.43
SPCS3P61009 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SPCS3P61009 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPCS3P61009 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPCS3P61009 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPCS3P61009 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPCS3P61009 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SPCS3P61009 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SPCS3P61009 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.75■□□□□ 0.43
SPCS3P61009 AC080038.3-201ENST00000623346 1952 ntBASIC17.75■□□□□ 0.43
SPCS3P61009 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.75■□□□□ 0.43
SPCS3P61009 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SPCS3P61009 AC010980.1-201ENST00000587192 1142 ntBASIC17.75■□□□□ 0.43
SPCS3P61009 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SPCS3P61009 SNX5-217ENST00000606557 1087 ntBASIC17.75■□□□□ 0.43
SPCS3P61009 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SPCS3P61009 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SPCS3P61009 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SPCS3P61009 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SPCS3P61009 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SPCS3P61009 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SPCS3P61009 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SPCS3P61009 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SPCS3P61009 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SPCS3P61009 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SPCS3P61009 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
SPCS3P61009 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SPCS3P61009 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC17.74■□□□□ 0.43
SPCS3P61009 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.74■□□□□ 0.43
SPCS3P61009 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms