Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.04■□□□□ 0.96
VSX2P58304 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VSX2P58304 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.04■□□□□ 0.96
VSX2P58304 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
VSX2P58304 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
VSX2P58304 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.03■□□□□ 0.96
VSX2P58304 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
VSX2P58304 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.03■□□□□ 0.96
VSX2P58304 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VSX2P58304 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.03■□□□□ 0.96
VSX2P58304 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
VSX2P58304 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VSX2P58304 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.02■□□□□ 0.96
VSX2P58304 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VSX2P58304 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
VSX2P58304 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
VSX2P58304 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.02■□□□□ 0.96
VSX2P58304 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
VSX2P58304 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.02■□□□□ 0.96
VSX2P58304 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
VSX2P58304 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VSX2P58304 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.02■□□□□ 0.96
VSX2P58304 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.02■□□□□ 0.96
VSX2P58304 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
VSX2P58304 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
VSX2P58304 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
VSX2P58304 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VSX2P58304 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VSX2P58304 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VSX2P58304 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
VSX2P58304 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VSX2P58304 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
VSX2P58304 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VSX2P58304 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
VSX2P58304 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.01■□□□□ 0.95
VSX2P58304 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21■□□□□ 0.95
VSX2P58304 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21■□□□□ 0.95
VSX2P58304 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21■□□□□ 0.95
VSX2P58304 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21■□□□□ 0.95
VSX2P58304 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
VSX2P58304 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
VSX2P58304 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VSX2P58304 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21■□□□□ 0.95
VSX2P58304 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
VSX2P58304 TSPY26P-201ENST00000476365 1326 ntBASIC21■□□□□ 0.95
VSX2P58304 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VSX2P58304 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
VSX2P58304 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VSX2P58304 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
VSX2P58304 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
VSX2P58304 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.99■□□□□ 0.95
VSX2P58304 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.99■□□□□ 0.95
VSX2P58304 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VSX2P58304 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
VSX2P58304 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
VSX2P58304 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VSX2P58304 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.98■□□□□ 0.95
VSX2P58304 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.98■□□□□ 0.95
VSX2P58304 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.98■□□□□ 0.95
VSX2P58304 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.98■□□□□ 0.95
VSX2P58304 IGHV3-19-201ENST00000521488 291 ntBASIC20.98■□□□□ 0.95
VSX2P58304 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.98■□□□□ 0.95
VSX2P58304 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.98■□□□□ 0.95
VSX2P58304 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VSX2P58304 DUSP8P5-201ENST00000422884 1815 ntBASIC20.98■□□□□ 0.95
VSX2P58304 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VSX2P58304 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
VSX2P58304 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VSX2P58304 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
VSX2P58304 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
VSX2P58304 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VSX2P58304 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VSX2P58304 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
VSX2P58304 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VSX2P58304 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VSX2P58304 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.97■□□□□ 0.95
VSX2P58304 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
VSX2P58304 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VSX2P58304 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.97■□□□□ 0.95
VSX2P58304 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.97■□□□□ 0.95
VSX2P58304 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.97■□□□□ 0.95
VSX2P58304 AP005435.1-201ENST00000529293 1178 ntBASIC20.97■□□□□ 0.95
VSX2P58304 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VSX2P58304 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VSX2P58304 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
VSX2P58304 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.96■□□□□ 0.95
VSX2P58304 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VSX2P58304 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VSX2P58304 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.96■□□□□ 0.95
VSX2P58304 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VSX2P58304 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VSX2P58304 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.96■□□□□ 0.95
VSX2P58304 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
VSX2P58304 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VSX2P58304 MIR935-201ENST00000401179 91 ntBASIC20.96■□□□□ 0.95
VSX2P58304 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.96■□□□□ 0.95
VSX2P58304 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VSX2P58304 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.96■□□□□ 0.95
VSX2P58304 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.96■□□□□ 0.95
VSX2P58304 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms