Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CLDN12P56749 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN12P56749 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.08■□□□□ 0.64
CLDN12P56749 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN12P56749 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN12P56749 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.08■□□□□ 0.64
CLDN12P56749 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN12P56749 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CLDN12P56749 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN12P56749 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN12P56749 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN12P56749 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.07■□□□□ 0.64
CLDN12P56749 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN12P56749 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.07■□□□□ 0.64
CLDN12P56749 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.07■□□□□ 0.64
CLDN12P56749 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN12P56749 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN12P56749 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN12P56749 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN12P56749 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CLDN12P56749 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CLDN12P56749 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CLDN12P56749 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN12P56749 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN12P56749 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.07■□□□□ 0.64
CLDN12P56749 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.07■□□□□ 0.64
CLDN12P56749 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CLDN12P56749 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN12P56749 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.06■□□□□ 0.64
CLDN12P56749 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN12P56749 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN12P56749 KRT18P60-201ENST00000312876 1297 ntBASIC19.06■□□□□ 0.64
CLDN12P56749 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.06■□□□□ 0.64
CLDN12P56749 AC139795.1-202ENST00000500444 432 ntBASIC19.06■□□□□ 0.64
CLDN12P56749 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN12P56749 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CLDN12P56749 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.06■□□□□ 0.64
CLDN12P56749 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN12P56749 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN12P56749 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN12P56749 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN12P56749 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN12P56749 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CLDN12P56749 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.06■□□□□ 0.64
CLDN12P56749 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.05■□□□□ 0.64
CLDN12P56749 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.05■□□□□ 0.64
CLDN12P56749 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN12P56749 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.05■□□□□ 0.64
CLDN12P56749 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN12P56749 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN12P56749 AC144652.1-201ENST00000609974 1624 ntBASIC19.05■□□□□ 0.64
CLDN12P56749 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN12P56749 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.05■□□□□ 0.64
CLDN12P56749 AC019171.1-201ENST00000601251 1056 ntBASIC19.05■□□□□ 0.64
CLDN12P56749 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN12P56749 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CLDN12P56749 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN12P56749 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.05■□□□□ 0.64
CLDN12P56749 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN12P56749 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CLDN12P56749 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN12P56749 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.05■□□□□ 0.64
CLDN12P56749 AC005229.4-201ENST00000610085 2198 ntBASIC19.05■□□□□ 0.64
CLDN12P56749 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN12P56749 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN12P56749 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN12P56749 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN12P56749 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CLDN12P56749 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CLDN12P56749 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CLDN12P56749 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.04■□□□□ 0.64
CLDN12P56749 DUX4L18-201ENST00000553347 1267 ntBASIC19.04■□□□□ 0.64
CLDN12P56749 MIR4281-201ENST00000580852 62 ntBASIC19.04■□□□□ 0.64
CLDN12P56749 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.04■□□□□ 0.64
CLDN12P56749 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN12P56749 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN12P56749 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN12P56749 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CLDN12P56749 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN12P56749 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.03■□□□□ 0.64
CLDN12P56749 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.03■□□□□ 0.64
CLDN12P56749 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CLDN12P56749 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN12P56749 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.02■□□□□ 0.64
CLDN12P56749 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CLDN12P56749 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CLDN12P56749 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN12P56749 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CLDN12P56749 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN12P56749 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN12P56749 RARRES2P2-201ENST00000394842 485 ntBASIC19.02■□□□□ 0.64
CLDN12P56749 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.64
CLDN12P56749 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN12P56749 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.02■□□□□ 0.64
CLDN12P56749 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.63
CLDN12P56749 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CLDN12P56749 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.01■□□□□ 0.63
CLDN12P56749 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
CLDN12P56749 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CLDN12P56749 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms