Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
GFRA1P56159 AC026271.2-201ENST00000428091 497 ntBASIC19.78■□□□□ 0.76
GFRA1P56159 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.78■□□□□ 0.76
GFRA1P56159 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
GFRA1P56159 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GFRA1P56159 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GFRA1P56159 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
GFRA1P56159 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GFRA1P56159 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
GFRA1P56159 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
GFRA1P56159 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GFRA1P56159 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GFRA1P56159 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GFRA1P56159 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
GFRA1P56159 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.77■□□□□ 0.76
GFRA1P56159 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
GFRA1P56159 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.77■□□□□ 0.75
GFRA1P56159 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
GFRA1P56159 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.76■□□□□ 0.75
GFRA1P56159 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.76■□□□□ 0.75
GFRA1P56159 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.76■□□□□ 0.75
GFRA1P56159 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.76■□□□□ 0.75
GFRA1P56159 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GFRA1P56159 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GFRA1P56159 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GFRA1P56159 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.76■□□□□ 0.75
GFRA1P56159 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
GFRA1P56159 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GFRA1P56159 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.75■□□□□ 0.75
GFRA1P56159 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
GFRA1P56159 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.75■□□□□ 0.75
GFRA1P56159 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GFRA1P56159 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.75■□□□□ 0.75
GFRA1P56159 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.75■□□□□ 0.75
GFRA1P56159 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.75■□□□□ 0.75
GFRA1P56159 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.75■□□□□ 0.75
GFRA1P56159 AL358852.1-201ENST00000623174 1268 ntBASIC19.75■□□□□ 0.75
GFRA1P56159 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
GFRA1P56159 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GFRA1P56159 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GFRA1P56159 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.74■□□□□ 0.75
GFRA1P56159 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GFRA1P56159 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
GFRA1P56159 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.74■□□□□ 0.75
GFRA1P56159 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GFRA1P56159 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GFRA1P56159 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.74■□□□□ 0.75
GFRA1P56159 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.74■□□□□ 0.75
GFRA1P56159 AC010141.3-201ENST00000456659 717 ntBASIC19.74■□□□□ 0.75
GFRA1P56159 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.74■□□□□ 0.75
GFRA1P56159 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.74■□□□□ 0.75
GFRA1P56159 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.74■□□□□ 0.75
GFRA1P56159 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.74■□□□□ 0.75
GFRA1P56159 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
GFRA1P56159 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
GFRA1P56159 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GFRA1P56159 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GFRA1P56159 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
GFRA1P56159 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.73■□□□□ 0.75
GFRA1P56159 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GFRA1P56159 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GFRA1P56159 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GFRA1P56159 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GFRA1P56159 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GFRA1P56159 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.73■□□□□ 0.75
GFRA1P56159 AC097381.1-201ENST00000429019 1296 ntBASIC19.73■□□□□ 0.75
GFRA1P56159 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.73■□□□□ 0.75
GFRA1P56159 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GFRA1P56159 AC012414.1-201ENST00000556676 535 ntBASIC19.73■□□□□ 0.75
GFRA1P56159 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.73■□□□□ 0.75
GFRA1P56159 AL354811.1-201ENST00000610286 706 ntBASIC19.73■□□□□ 0.75
GFRA1P56159 MIR6821-201ENST00000617625 74 ntBASIC19.73■□□□□ 0.75
GFRA1P56159 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.73■□□□□ 0.75
GFRA1P56159 AC087239.1-201ENST00000622671 572 ntBASIC19.73■□□□□ 0.75
GFRA1P56159 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GFRA1P56159 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GFRA1P56159 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
GFRA1P56159 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.72■□□□□ 0.75
GFRA1P56159 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.72■□□□□ 0.75
GFRA1P56159 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GFRA1P56159 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GFRA1P56159 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GFRA1P56159 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GFRA1P56159 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
GFRA1P56159 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
GFRA1P56159 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.72■□□□□ 0.75
GFRA1P56159 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.72■□□□□ 0.75
GFRA1P56159 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
GFRA1P56159 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.72■□□□□ 0.75
GFRA1P56159 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GFRA1P56159 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GFRA1P56159 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GFRA1P56159 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GFRA1P56159 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GFRA1P56159 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GFRA1P56159 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.71■□□□□ 0.75
GFRA1P56159 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GFRA1P56159 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.71■□□□□ 0.75
GFRA1P56159 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GFRA1P56159 DUSP8P5-201ENST00000422884 1815 ntBASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms