Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.96■□□□□ 0.79
SUMO3P55854 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
SUMO3P55854 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SUMO3P55854 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SUMO3P55854 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SUMO3P55854 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.95■□□□□ 0.78
SUMO3P55854 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SUMO3P55854 C1orf229-201ENST00000623686 2258 ntBASIC19.95■□□□□ 0.78
SUMO3P55854 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SUMO3P55854 EDA-201ENST00000338901 1233 ntBASIC19.95■□□□□ 0.78
SUMO3P55854 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.95■□□□□ 0.78
SUMO3P55854 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.95■□□□□ 0.78
SUMO3P55854 PBX2P1-201ENST00000493219 1291 ntBASIC19.95■□□□□ 0.78
SUMO3P55854 AC133561.4-201ENST00000566112 224 ntBASIC19.95■□□□□ 0.78
SUMO3P55854 AL139246.5-201ENST00000606645 996 ntBASIC19.95■□□□□ 0.78
SUMO3P55854 CA15P2-201ENST00000611168 834 ntBASIC19.95■□□□□ 0.78
SUMO3P55854 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SUMO3P55854 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SUMO3P55854 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SUMO3P55854 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SUMO3P55854 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SUMO3P55854 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SUMO3P55854 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SUMO3P55854 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SUMO3P55854 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.94■□□□□ 0.78
SUMO3P55854 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SUMO3P55854 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SUMO3P55854 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SUMO3P55854 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SUMO3P55854 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.94■□□□□ 0.78
SUMO3P55854 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SUMO3P55854 AC127496.7-201ENST00000625110 1798 ntBASIC19.94■□□□□ 0.78
SUMO3P55854 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.94■□□□□ 0.78
SUMO3P55854 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.94■□□□□ 0.78
SUMO3P55854 SLC47A1P1-202ENST00000449666 945 ntBASIC19.94■□□□□ 0.78
SUMO3P55854 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.94■□□□□ 0.78
SUMO3P55854 AC087239.1-201ENST00000622671 572 ntBASIC19.94■□□□□ 0.78
SUMO3P55854 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SUMO3P55854 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SUMO3P55854 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
SUMO3P55854 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SUMO3P55854 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SUMO3P55854 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SUMO3P55854 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SUMO3P55854 AP005435.1-201ENST00000529293 1178 ntBASIC19.93■□□□□ 0.78
SUMO3P55854 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SUMO3P55854 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SUMO3P55854 AC087742.1-201ENST00000575880 1738 ntBASIC19.93■□□□□ 0.78
SUMO3P55854 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SUMO3P55854 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SUMO3P55854 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SUMO3P55854 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SUMO3P55854 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.92■□□□□ 0.78
SUMO3P55854 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SUMO3P55854 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SUMO3P55854 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SUMO3P55854 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SUMO3P55854 AC010525.1-201ENST00000585559 441 ntBASIC19.92■□□□□ 0.78
SUMO3P55854 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SUMO3P55854 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SUMO3P55854 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SUMO3P55854 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SUMO3P55854 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SUMO3P55854 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
SUMO3P55854 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SUMO3P55854 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SUMO3P55854 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.91■□□□□ 0.78
SUMO3P55854 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.91■□□□□ 0.78
SUMO3P55854 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SUMO3P55854 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SUMO3P55854 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.91■□□□□ 0.78
SUMO3P55854 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SUMO3P55854 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.91■□□□□ 0.78
SUMO3P55854 AC233992.3-201ENST00000607491 485 ntBASIC19.91■□□□□ 0.78
SUMO3P55854 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.91■□□□□ 0.78
SUMO3P55854 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.91■□□□□ 0.78
SUMO3P55854 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SUMO3P55854 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SUMO3P55854 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.91■□□□□ 0.78
SUMO3P55854 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SUMO3P55854 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SUMO3P55854 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SUMO3P55854 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.9■□□□□ 0.78
SUMO3P55854 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SUMO3P55854 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SUMO3P55854 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
SUMO3P55854 AC027682.1-201ENST00000562846 899 ntBASIC19.9■□□□□ 0.78
SUMO3P55854 AL355001.2-201ENST00000620617 1191 ntBASIC19.9■□□□□ 0.78
SUMO3P55854 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SUMO3P55854 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SUMO3P55854 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.9■□□□□ 0.78
SUMO3P55854 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.9■□□□□ 0.78
SUMO3P55854 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SUMO3P55854 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SUMO3P55854 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SUMO3P55854 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SUMO3P55854 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SUMO3P55854 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SUMO3P55854 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SUMO3P55854 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms