Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ZNF140P52738 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ZNF140P52738 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.97■■□□□ 1.11
ZNF140P52738 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ZNF140P52738 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
ZNF140P52738 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.96■■□□□ 1.11
ZNF140P52738 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ZNF140P52738 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
ZNF140P52738 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
ZNF140P52738 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ZNF140P52738 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ZNF140P52738 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.96■■□□□ 1.11
ZNF140P52738 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ZNF140P52738 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.96■■□□□ 1.11
ZNF140P52738 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
ZNF140P52738 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.96■■□□□ 1.11
ZNF140P52738 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.96■■□□□ 1.11
ZNF140P52738 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
ZNF140P52738 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ZNF140P52738 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ZNF140P52738 GUSBP5-202ENST00000510805 1989 ntBASIC21.96■■□□□ 1.11
ZNF140P52738 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ZNF140P52738 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
ZNF140P52738 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF140P52738 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF140P52738 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.95■■□□□ 1.1
ZNF140P52738 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF140P52738 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.95■■□□□ 1.1
ZNF140P52738 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.95■■□□□ 1.1
ZNF140P52738 AL031602.1-201ENST00000633169 911 ntBASIC21.95■■□□□ 1.1
ZNF140P52738 AL117328.2-201ENST00000624617 1940 ntBASIC21.95■■□□□ 1.1
ZNF140P52738 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF140P52738 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF140P52738 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF140P52738 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF140P52738 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF140P52738 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
ZNF140P52738 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
ZNF140P52738 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.94■■□□□ 1.1
ZNF140P52738 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF140P52738 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF140P52738 UNC93B3-201ENST00000308076 687 ntBASIC21.94■■□□□ 1.1
ZNF140P52738 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF140P52738 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF140P52738 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
ZNF140P52738 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF140P52738 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.94■■□□□ 1.1
ZNF140P52738 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF140P52738 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
ZNF140P52738 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZNF140P52738 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZNF140P52738 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ZNF140P52738 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZNF140P52738 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
ZNF140P52738 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.93■■□□□ 1.1
ZNF140P52738 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
ZNF140P52738 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ZNF140P52738 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF140P52738 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
ZNF140P52738 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
ZNF140P52738 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF140P52738 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF140P52738 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF140P52738 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.92■■□□□ 1.1
ZNF140P52738 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.92■■□□□ 1.1
ZNF140P52738 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.92■■□□□ 1.1
ZNF140P52738 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF140P52738 AC010525.1-201ENST00000585559 441 ntBASIC21.92■■□□□ 1.1
ZNF140P52738 CA15P2-201ENST00000611168 834 ntBASIC21.92■■□□□ 1.1
ZNF140P52738 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF140P52738 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
ZNF140P52738 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF140P52738 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF140P52738 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF140P52738 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF140P52738 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF140P52738 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF140P52738 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.91■■□□□ 1.1
ZNF140P52738 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.91■■□□□ 1.1
ZNF140P52738 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.91■■□□□ 1.1
ZNF140P52738 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF140P52738 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF140P52738 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF140P52738 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF140P52738 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF140P52738 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF140P52738 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF140P52738 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ZNF140P52738 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ZNF140P52738 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
ZNF140P52738 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
ZNF140P52738 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ZNF140P52738 AC024257.2-201ENST00000549699 147 ntBASIC21.9■■□□□ 1.1
ZNF140P52738 AL136162.1-201ENST00000607711 1078 ntBASIC21.9■■□□□ 1.1
ZNF140P52738 AC080038.3-201ENST00000623346 1952 ntBASIC21.9■■□□□ 1.1
ZNF140P52738 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ZNF140P52738 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
ZNF140P52738 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
ZNF140P52738 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
ZNF140P52738 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms