Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
RAB5CP51148 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB5CP51148 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.67■□□□□ 0.42
RAB5CP51148 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RAB5CP51148 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB5CP51148 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB5CP51148 AL022069.1-201ENST00000568025 1636 ntBASIC17.66■□□□□ 0.42
RAB5CP51148 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RAB5CP51148 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB5CP51148 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
RAB5CP51148 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC17.66■□□□□ 0.42
RAB5CP51148 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB5CP51148 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.66■□□□□ 0.42
RAB5CP51148 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
RAB5CP51148 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.66■□□□□ 0.42
RAB5CP51148 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB5CP51148 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB5CP51148 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB5CP51148 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
RAB5CP51148 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB5CP51148 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.66■□□□□ 0.42
RAB5CP51148 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB5CP51148 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
RAB5CP51148 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB5CP51148 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RAB5CP51148 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RAB5CP51148 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB5CP51148 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RAB5CP51148 AC007952.6-201ENST00000573168 2673 ntBASIC17.65■□□□□ 0.42
RAB5CP51148 AC003957.1-201ENST00000625108 2673 ntBASIC17.65■□□□□ 0.42
RAB5CP51148 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
RAB5CP51148 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RAB5CP51148 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB5CP51148 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB5CP51148 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC17.65■□□□□ 0.42
RAB5CP51148 EI24-204ENST00000527235 1625 ntTSL 5 BASIC17.65■□□□□ 0.42
RAB5CP51148 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RAB5CP51148 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RAB5CP51148 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB5CP51148 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB5CP51148 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.64■□□□□ 0.41
RAB5CP51148 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAB5CP51148 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC17.64■□□□□ 0.41
RAB5CP51148 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.64■□□□□ 0.41
RAB5CP51148 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.64■□□□□ 0.41
RAB5CP51148 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB5CP51148 ALDH1A3-203ENST00000557963 1670 ntBASIC17.64■□□□□ 0.41
RAB5CP51148 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB5CP51148 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.63■□□□□ 0.41
RAB5CP51148 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB5CP51148 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RAB5CP51148 AC244015.2-201ENST00000616358 1861 ntBASIC17.63■□□□□ 0.41
RAB5CP51148 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAB5CP51148 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB5CP51148 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.63■□□□□ 0.41
RAB5CP51148 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAB5CP51148 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB5CP51148 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB5CP51148 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB5CP51148 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB5CP51148 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB5CP51148 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
RAB5CP51148 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB5CP51148 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.63■□□□□ 0.41
RAB5CP51148 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB5CP51148 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB5CP51148 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB5CP51148 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAB5CP51148 AC090877.2-201ENST00000558441 1738 ntBASIC17.62■□□□□ 0.41
RAB5CP51148 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB5CP51148 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB5CP51148 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB5CP51148 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RAB5CP51148 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAB5CP51148 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.62■□□□□ 0.41
RAB5CP51148 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB5CP51148 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RAB5CP51148 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RAB5CP51148 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC17.62■□□□□ 0.41
RAB5CP51148 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB5CP51148 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB5CP51148 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB5CP51148 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB5CP51148 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB5CP51148 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAB5CP51148 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB5CP51148 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB5CP51148 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RAB5CP51148 AC138932.1-201ENST00000534164 6830 ntBASIC17.61■□□□□ 0.41
RAB5CP51148 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC17.61■□□□□ 0.41
RAB5CP51148 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAB5CP51148 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAB5CP51148 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB5CP51148 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB5CP51148 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.61■□□□□ 0.41
RAB5CP51148 AC087742.1-201ENST00000575880 1738 ntBASIC17.61■□□□□ 0.41
RAB5CP51148 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB5CP51148 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAB5CP51148 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB5CP51148 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms