Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF144AP50876 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.36■□□□□ 0.85
RNF144AP50876 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.36■□□□□ 0.85
RNF144AP50876 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.36■□□□□ 0.85
RNF144AP50876 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF144AP50876 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF144AP50876 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF144AP50876 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
RNF144AP50876 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF144AP50876 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.35■□□□□ 0.85
RNF144AP50876 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.35■□□□□ 0.85
RNF144AP50876 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RNF144AP50876 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF144AP50876 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF144AP50876 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF144AP50876 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF144AP50876 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
RNF144AP50876 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
RNF144AP50876 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RNF144AP50876 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF144AP50876 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF144AP50876 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF144AP50876 GUSBP5-202ENST00000510805 1989 ntBASIC20.34■□□□□ 0.85
RNF144AP50876 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF144AP50876 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF144AP50876 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF144AP50876 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF144AP50876 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF144AP50876 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
RNF144AP50876 pRNA.6-201ENST00000610482 90 ntBASIC20.34■□□□□ 0.85
RNF144AP50876 pRNA.5-201ENST00000612139 90 ntBASIC20.34■□□□□ 0.85
RNF144AP50876 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF144AP50876 pRNA.11-201ENST00000618423 90 ntBASIC20.34■□□□□ 0.85
RNF144AP50876 pRNA.13-201ENST00000619112 90 ntBASIC20.34■□□□□ 0.85
RNF144AP50876 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF144AP50876 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF144AP50876 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF144AP50876 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF144AP50876 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF144AP50876 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF144AP50876 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.33■□□□□ 0.85
RNF144AP50876 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.33■□□□□ 0.85
RNF144AP50876 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
RNF144AP50876 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF144AP50876 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF144AP50876 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF144AP50876 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF144AP50876 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF144AP50876 SRD5A1P1-201ENST00000442297 786 ntBASIC20.33■□□□□ 0.85
RNF144AP50876 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RNF144AP50876 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.33■□□□□ 0.85
RNF144AP50876 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.33■□□□□ 0.85
RNF144AP50876 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF144AP50876 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF144AP50876 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.33■□□□□ 0.84
RNF144AP50876 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF144AP50876 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
RNF144AP50876 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF144AP50876 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
RNF144AP50876 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF144AP50876 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF144AP50876 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF144AP50876 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.32■□□□□ 0.84
RNF144AP50876 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.32■□□□□ 0.84
RNF144AP50876 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
RNF144AP50876 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF144AP50876 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.32■□□□□ 0.84
RNF144AP50876 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF144AP50876 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF144AP50876 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF144AP50876 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF144AP50876 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.32■□□□□ 0.84
RNF144AP50876 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF144AP50876 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF144AP50876 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF144AP50876 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF144AP50876 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF144AP50876 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF144AP50876 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF144AP50876 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF144AP50876 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF144AP50876 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF144AP50876 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF144AP50876 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF144AP50876 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF144AP50876 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF144AP50876 LINC00565-201ENST00000562710 2331 ntBASIC20.31■□□□□ 0.84
RNF144AP50876 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF144AP50876 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF144AP50876 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF144AP50876 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF144AP50876 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF144AP50876 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF144AP50876 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
RNF144AP50876 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF144AP50876 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF144AP50876 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF144AP50876 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF144AP50876 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF144AP50876 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms