Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLK3P49761 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.73■□□□□ 0.91
CLK3P49761 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.73■□□□□ 0.91
CLK3P49761 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CLK3P49761 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLK3P49761 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLK3P49761 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLK3P49761 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLK3P49761 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CLK3P49761 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.73■□□□□ 0.91
CLK3P49761 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLK3P49761 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLK3P49761 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLK3P49761 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.72■□□□□ 0.91
CLK3P49761 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.72■□□□□ 0.91
CLK3P49761 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.72■□□□□ 0.91
CLK3P49761 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.72■□□□□ 0.91
CLK3P49761 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLK3P49761 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLK3P49761 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.71■□□□□ 0.91
CLK3P49761 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CLK3P49761 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLK3P49761 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLK3P49761 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.71■□□□□ 0.91
CLK3P49761 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLK3P49761 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.71■□□□□ 0.91
CLK3P49761 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLK3P49761 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.71■□□□□ 0.91
CLK3P49761 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLK3P49761 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLK3P49761 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.71■□□□□ 0.91
CLK3P49761 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.71■□□□□ 0.91
CLK3P49761 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.7■□□□□ 0.9
CLK3P49761 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CLK3P49761 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLK3P49761 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLK3P49761 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.7■□□□□ 0.9
CLK3P49761 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.7■□□□□ 0.9
CLK3P49761 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.7■□□□□ 0.9
CLK3P49761 AL117332.1-201ENST00000622628 974 ntBASIC20.7■□□□□ 0.9
CLK3P49761 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLK3P49761 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLK3P49761 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLK3P49761 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLK3P49761 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLK3P49761 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CLK3P49761 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLK3P49761 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLK3P49761 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLK3P49761 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLK3P49761 MIR3621-201ENST00000580529 85 ntBASIC20.69■□□□□ 0.9
CLK3P49761 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLK3P49761 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CLK3P49761 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLK3P49761 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.69■□□□□ 0.9
CLK3P49761 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLK3P49761 AL137060.1-201ENST00000618151 2648 ntBASIC20.69■□□□□ 0.9
CLK3P49761 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.69■□□□□ 0.9
CLK3P49761 ESRRAP2-201ENST00000418437 1549 ntBASIC20.68■□□□□ 0.9
CLK3P49761 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLK3P49761 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLK3P49761 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLK3P49761 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLK3P49761 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLK3P49761 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLK3P49761 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CLK3P49761 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.68■□□□□ 0.9
CLK3P49761 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.68■□□□□ 0.9
CLK3P49761 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.68■□□□□ 0.9
CLK3P49761 AC131212.1-201ENST00000613771 668 ntBASIC20.68■□□□□ 0.9
CLK3P49761 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLK3P49761 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLK3P49761 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLK3P49761 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLK3P49761 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.68■□□□□ 0.9
CLK3P49761 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
CLK3P49761 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLK3P49761 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLK3P49761 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLK3P49761 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLK3P49761 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLK3P49761 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLK3P49761 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.67■□□□□ 0.9
CLK3P49761 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.67■□□□□ 0.9
CLK3P49761 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.67■□□□□ 0.9
CLK3P49761 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.67■□□□□ 0.9
CLK3P49761 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLK3P49761 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
CLK3P49761 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLK3P49761 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.67■□□□□ 0.9
CLK3P49761 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.67■□□□□ 0.9
CLK3P49761 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLK3P49761 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLK3P49761 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLK3P49761 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CLK3P49761 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLK3P49761 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.66■□□□□ 0.9
CLK3P49761 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.66■□□□□ 0.9
CLK3P49761 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLK3P49761 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms