Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
PRIM2P49643 FP325331.1-202ENST00000623531 1380 ntBASIC20.83■□□□□ 0.92
PRIM2P49643 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
PRIM2P49643 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PRIM2P49643 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRIM2P49643 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PRIM2P49643 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.82■□□□□ 0.92
PRIM2P49643 KRT16P3-201ENST00000439127 1283 ntBASIC20.82■□□□□ 0.92
PRIM2P49643 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.82■□□□□ 0.92
PRIM2P49643 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRIM2P49643 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRIM2P49643 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PRIM2P49643 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRIM2P49643 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PRIM2P49643 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRIM2P49643 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PRIM2P49643 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
PRIM2P49643 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRIM2P49643 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRIM2P49643 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRIM2P49643 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
PRIM2P49643 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.81■□□□□ 0.92
PRIM2P49643 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PRIM2P49643 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
PRIM2P49643 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRIM2P49643 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRIM2P49643 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRIM2P49643 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PRIM2P49643 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.8■□□□□ 0.92
PRIM2P49643 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRIM2P49643 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
PRIM2P49643 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.8■□□□□ 0.92
PRIM2P49643 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.8■□□□□ 0.92
PRIM2P49643 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRIM2P49643 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.8■□□□□ 0.92
PRIM2P49643 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PRIM2P49643 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRIM2P49643 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRIM2P49643 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PRIM2P49643 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRIM2P49643 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRIM2P49643 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRIM2P49643 AC009102.2-201ENST00000606772 1639 ntBASIC20.79■□□□□ 0.92
PRIM2P49643 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRIM2P49643 LINC01529-204ENST00000636474 1715 ntBASIC20.79■□□□□ 0.92
PRIM2P49643 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRIM2P49643 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PRIM2P49643 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PRIM2P49643 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
PRIM2P49643 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRIM2P49643 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PRIM2P49643 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PRIM2P49643 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRIM2P49643 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
PRIM2P49643 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
PRIM2P49643 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
PRIM2P49643 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRIM2P49643 GUSBP5-201ENST00000418136 578 ntBASIC20.78■□□□□ 0.92
PRIM2P49643 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.78■□□□□ 0.92
PRIM2P49643 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.78■□□□□ 0.92
PRIM2P49643 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRIM2P49643 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PRIM2P49643 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.78■□□□□ 0.92
PRIM2P49643 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.78■□□□□ 0.92
PRIM2P49643 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PRIM2P49643 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
PRIM2P49643 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRIM2P49643 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRIM2P49643 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRIM2P49643 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRIM2P49643 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.77■□□□□ 0.92
PRIM2P49643 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.77■□□□□ 0.92
PRIM2P49643 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.77■□□□□ 0.92
PRIM2P49643 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.77■□□□□ 0.92
PRIM2P49643 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
PRIM2P49643 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRIM2P49643 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
PRIM2P49643 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.91
PRIM2P49643 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRIM2P49643 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
PRIM2P49643 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRIM2P49643 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRIM2P49643 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRIM2P49643 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRIM2P49643 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.76■□□□□ 0.91
PRIM2P49643 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PRIM2P49643 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRIM2P49643 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PRIM2P49643 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.76■□□□□ 0.91
PRIM2P49643 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRIM2P49643 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRIM2P49643 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRIM2P49643 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRIM2P49643 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PRIM2P49643 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRIM2P49643 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRIM2P49643 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.76■□□□□ 0.91
PRIM2P49643 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PRIM2P49643 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PRIM2P49643 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms