Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
ATP6V1AP38606 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
ATP6V1AP38606 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
ATP6V1AP38606 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC28.35■■■□□ 2.13
ATP6V1AP38606 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
ATP6V1AP38606 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
ATP6V1AP38606 TESC-206ENST00000541210 936 ntTSL 3 BASIC28.35■■■□□ 2.13
ATP6V1AP38606 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC28.35■■■□□ 2.13
ATP6V1AP38606 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
ATP6V1AP38606 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
ATP6V1AP38606 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
ATP6V1AP38606 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
ATP6V1AP38606 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC28.35■■■□□ 2.13
ATP6V1AP38606 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
ATP6V1AP38606 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
ATP6V1AP38606 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
ATP6V1AP38606 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
ATP6V1AP38606 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC28.34■■■□□ 2.13
ATP6V1AP38606 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
ATP6V1AP38606 METTL26-203ENST00000397664 604 ntTSL 2 BASIC28.34■■■□□ 2.13
ATP6V1AP38606 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
ATP6V1AP38606 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC28.34■■■□□ 2.13
ATP6V1AP38606 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
ATP6V1AP38606 AC068587.7-201ENST00000641602 218 ntBASIC28.34■■■□□ 2.13
ATP6V1AP38606 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
ATP6V1AP38606 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
ATP6V1AP38606 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
ATP6V1AP38606 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
ATP6V1AP38606 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
ATP6V1AP38606 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC28.33■■■□□ 2.13
ATP6V1AP38606 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
ATP6V1AP38606 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC28.33■■■□□ 2.13
ATP6V1AP38606 SPI1-203ENST00000533030 661 ntTSL 2 BASIC28.33■■■□□ 2.13
ATP6V1AP38606 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
ATP6V1AP38606 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC28.32■■■□□ 2.12
ATP6V1AP38606 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
ATP6V1AP38606 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
ATP6V1AP38606 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
ATP6V1AP38606 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC28.32■■■□□ 2.12
ATP6V1AP38606 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
ATP6V1AP38606 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC28.32■■■□□ 2.12
ATP6V1AP38606 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC28.32■■■□□ 2.12
ATP6V1AP38606 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC28.32■■■□□ 2.12
ATP6V1AP38606 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
ATP6V1AP38606 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
ATP6V1AP38606 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
ATP6V1AP38606 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
ATP6V1AP38606 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC28.32■■■□□ 2.12
ATP6V1AP38606 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC28.31■■■□□ 2.12
ATP6V1AP38606 MIR663A-201ENST00000385250 93 ntBASIC28.31■■■□□ 2.12
ATP6V1AP38606 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
ATP6V1AP38606 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC28.31■■■□□ 2.12
ATP6V1AP38606 WT1-AS_3.1-201ENST00000613262 234 ntBASIC28.31■■■□□ 2.12
ATP6V1AP38606 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
ATP6V1AP38606 ESRRAP2-201ENST00000418437 1549 ntBASIC28.31■■■□□ 2.12
ATP6V1AP38606 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC28.31■■■□□ 2.12
ATP6V1AP38606 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC28.3■■■□□ 2.12
ATP6V1AP38606 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
ATP6V1AP38606 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC28.3■■■□□ 2.12
ATP6V1AP38606 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
ATP6V1AP38606 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
ATP6V1AP38606 KRT18P11-201ENST00000435214 1283 ntBASIC28.3■■■□□ 2.12
ATP6V1AP38606 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC28.3■■■□□ 2.12
ATP6V1AP38606 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC28.3■■■□□ 2.12
ATP6V1AP38606 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC28.3■■■□□ 2.12
ATP6V1AP38606 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC28.3■■■□□ 2.12
ATP6V1AP38606 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC28.3■■■□□ 2.12
ATP6V1AP38606 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
ATP6V1AP38606 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC28.29■■■□□ 2.12
ATP6V1AP38606 AC010141.3-201ENST00000456659 717 ntBASIC28.29■■■□□ 2.12
ATP6V1AP38606 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC28.29■■■□□ 2.12
ATP6V1AP38606 MED17-227ENST00000640521 2047 ntTSL 5 BASIC28.29■■■□□ 2.12
ATP6V1AP38606 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC28.28■■■□□ 2.12
ATP6V1AP38606 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC28.28■■■□□ 2.12
ATP6V1AP38606 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
ATP6V1AP38606 AC079630.1-202ENST00000618127 1840 ntBASIC28.28■■■□□ 2.12
ATP6V1AP38606 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
ATP6V1AP38606 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC28.28■■■□□ 2.12
ATP6V1AP38606 AC087239.1-201ENST00000622671 572 ntBASIC28.28■■■□□ 2.12
ATP6V1AP38606 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
ATP6V1AP38606 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
ATP6V1AP38606 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC28.28■■■□□ 2.12
ATP6V1AP38606 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
ATP6V1AP38606 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
ATP6V1AP38606 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
ATP6V1AP38606 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
ATP6V1AP38606 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC28.27■■■□□ 2.12
ATP6V1AP38606 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC28.27■■■□□ 2.12
ATP6V1AP38606 CPT2-209ENST00000636935 803 ntTSL 5 BASIC28.27■■■□□ 2.12
ATP6V1AP38606 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
ATP6V1AP38606 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC28.26■■■□□ 2.12
ATP6V1AP38606 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
ATP6V1AP38606 AC142381.3-201ENST00000568208 1670 ntBASIC28.26■■■□□ 2.12
ATP6V1AP38606 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC28.26■■■□□ 2.11
ATP6V1AP38606 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
ATP6V1AP38606 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
ATP6V1AP38606 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
ATP6V1AP38606 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC28.26■■■□□ 2.11
ATP6V1AP38606 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
ATP6V1AP38606 GPX1P1-201ENST00000388829 606 ntBASIC28.26■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms