Protein–RNA interactions for Protein: P36026

UBP11, Ubiquitin carboxyl-terminal hydrolase 11, yeastyeast

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP11P36026 YMR178WYMR178W 825 nt4.51□□□□□ -1.69
UBP11P36026 SSP2YOR242C 1116 nt4.51□□□□□ -1.69
UBP11P36026 CBP3YPL215W 1008 nt4.51□□□□□ -1.69
UBP11P36026 CDC48YDL126C 2508 nt4.5□□□□□ -1.69
UBP11P36026 MET17YLR303W 1335 nt4.5□□□□□ -1.69
UBP11P36026 HMS1YOR032C 1305 nt4.5□□□□□ -1.69
UBP11P36026 BRE4YDL231C 3378 nt4.5□□□□□ -1.69
UBP11P36026 YNR065CYNR065C 3351 nt4.5□□□□□ -1.69
UBP11P36026 MDM38YOL027C 1722 nt4.5□□□□□ -1.69
UBP11P36026 MRP4YHL004W 1185 nt4.5□□□□□ -1.69
UBP11P36026 IMP2YMR035W 534 nt4.5□□□□□ -1.69
UBP11P36026 DSC2YOL073C 969 nt4.5□□□□□ -1.69
UBP11P36026 SSB1YDL229W 1842 nt4.5□□□□□ -1.69
UBP11P36026 RKM3YBR030W 1659 nt4.5□□□□□ -1.69
UBP11P36026 RPG1YBR079C 2895 nt4.49□□□□□ -1.69
UBP11P36026 YCR023CYCR023C 1836 nt4.49□□□□□ -1.69
UBP11P36026 FAR10YLR238W 1437 nt4.49□□□□□ -1.69
UBP11P36026 MIH1YMR036C 1665 nt4.49□□□□□ -1.69
UBP11P36026 SUP56tL(CAA)A 82 nt4.49□□□□□ -1.69
UBP11P36026 SUP53tL(CAA)C 82 nt4.49□□□□□ -1.69
UBP11P36026 tL(CAA)DtL(CAA)D 82 nt4.49□□□□□ -1.69
UBP11P36026 tL(CAA)G1tL(CAA)G1 82 nt4.49□□□□□ -1.69
UBP11P36026 SUP54tL(CAA)G2 82 nt4.49□□□□□ -1.69
UBP11P36026 tL(CAA)G3tL(CAA)G3 82 nt4.49□□□□□ -1.69
UBP11P36026 tL(CAA)KtL(CAA)K 82 nt4.49□□□□□ -1.69
UBP11P36026 tL(CAA)LtL(CAA)L 82 nt4.49□□□□□ -1.69
UBP11P36026 tL(CAA)MtL(CAA)M 82 nt4.49□□□□□ -1.69
UBP11P36026 tL(CAA)NtL(CAA)N 82 nt4.49□□□□□ -1.69
UBP11P36026 YGL152CYGL152C 678 nt4.49□□□□□ -1.69
UBP11P36026 CDC12YHR107C 1224 nt4.49□□□□□ -1.69
UBP11P36026 KTR2YKR061W 1278 nt4.49□□□□□ -1.69
UBP11P36026 RAD10YML095C 633 nt4.49□□□□□ -1.69
UBP11P36026 AIM39YOL053W 1188 nt4.49□□□□□ -1.69
UBP11P36026 MED7YOL135C 669 nt4.49□□□□□ -1.69
UBP11P36026 DCS2YOR173W 1062 nt4.49□□□□□ -1.69
UBP11P36026 NCE102YPR149W 522 nt4.49□□□□□ -1.69
UBP11P36026 CNS1YBR155W 1158 nt4.49□□□□□ -1.69
UBP11P36026 SEC2YNL272C 2280 nt4.49□□□□□ -1.69
UBP11P36026 CLN2YPL256C 1638 nt4.49□□□□□ -1.69
UBP11P36026 PUF2YPR042C 3228 nt4.49□□□□□ -1.69
UBP11P36026 SLM5YCR024C 1479 nt4.49□□□□□ -1.69
UBP11P36026 RCM1YNL022C 1473 nt4.49□□□□□ -1.69
UBP11P36026 CLB5YPR120C 1308 nt4.48□□□□□ -1.69
UBP11P36026 PDR5YOR153W 4536 nt4.48□□□□□ -1.69
UBP11P36026 FDC1YDR539W 1512 nt4.48□□□□□ -1.69
UBP11P36026 RTK1YDL025C 1863 nt4.48□□□□□ -1.69
UBP11P36026 THI13YDL244W 1023 nt4.48□□□□□ -1.69
UBP11P36026 SAE3YHR079C-A 276 nt4.48□□□□□ -1.69
UBP11P36026 FUR1YHR128W 651 nt4.48□□□□□ -1.69
UBP11P36026 THI11YJR156C 1023 nt4.48□□□□□ -1.69
UBP11P36026 SED5YLR026C 1023 nt4.48□□□□□ -1.69
UBP11P36026 EOS1YNL080C 1101 nt4.48□□□□□ -1.69
UBP11P36026 ATG8YBL078C 354 nt4.48□□□□□ -1.69
UBP11P36026 YOL166CYOL166C 339 nt4.48□□□□□ -1.69
UBP11P36026 YPR174CYPR174C 666 nt4.48□□□□□ -1.69
UBP11P36026 GIP4YAL031C 2283 nt4.48□□□□□ -1.69
UBP11P36026 NAM9YNL137C 1461 nt4.48□□□□□ -1.69
UBP11P36026 HOYDL227C 1761 nt4.48□□□□□ -1.69
UBP11P36026 RPL24AYGL031C 468 nt4.47□□□□□ -1.69
UBP11P36026 YHB1YGR234W 1200 nt4.47□□□□□ -1.69
UBP11P36026 IGO2YHR132W-A 396 nt4.47□□□□□ -1.69
UBP11P36026 YJR056CYJR056C 711 nt4.47□□□□□ -1.69
UBP11P36026 YKL177WYKL177W 339 nt4.47□□□□□ -1.69
UBP11P36026 PSY3YLR376C 729 nt4.47□□□□□ -1.69
UBP11P36026 CTL1YMR180C 963 nt4.47□□□□□ -1.69
UBP11P36026 RET3YPL010W 570 nt4.47□□□□□ -1.69
UBP11P36026 CDC15YAR019C 2925 nt4.47□□□□□ -1.69
UBP11P36026 PEP5YMR231W 3090 nt4.47□□□□□ -1.69
UBP11P36026 SRO9YCL037C 1305 nt4.46□□□□□ -1.69
UBP11P36026 PEX30YLR324W 1572 nt4.46□□□□□ -1.7
UBP11P36026 YCR101CYCR101C 549 nt4.46□□□□□ -1.7
UBP11P36026 MSS2YDL107W 1056 nt4.46□□□□□ -1.7
UBP11P36026 SRB5YGR104C 924 nt4.46□□□□□ -1.7
UBP11P36026 LAC1YKL008C 1257 nt4.46□□□□□ -1.7
UBP11P36026 YLR363W-AYLR363W-A 258 nt4.46□□□□□ -1.7
UBP11P36026 YBL036CYBL036C 774 nt4.46□□□□□ -1.7
UBP11P36026 RNA1YMR235C 1224 nt4.46□□□□□ -1.7
UBP11P36026 SLX1YBR228W 915 nt4.46□□□□□ -1.7
UBP11P36026 AIM21YIR003W 2040 nt4.46□□□□□ -1.7
UBP11P36026 YFR045WYFR045W 930 nt4.45□□□□□ -1.7
UBP11P36026 YHR069C-AYHR069C-A 363 nt4.45□□□□□ -1.7
UBP11P36026 RPC17YJL011C 486 nt4.45□□□□□ -1.7
UBP11P36026 YAE1YJR067C 426 nt4.45□□□□□ -1.7
UBP11P36026 DID4YKL002W 699 nt4.45□□□□□ -1.7
UBP11P36026 CDC73YLR418C 1182 nt4.45□□□□□ -1.7
UBP11P36026 WRS1YOL097C 1299 nt4.45□□□□□ -1.7
UBP11P36026 RPS19AYOL121C 435 nt4.45□□□□□ -1.7
UBP11P36026 PBN1YCL052C 1251 nt4.45□□□□□ -1.7
UBP11P36026 CDC9YDL164C 2268 nt4.45□□□□□ -1.7
UBP11P36026 PUT2YHR037W 1728 nt4.45□□□□□ -1.7
UBP11P36026 TAF12YDR145W 1620 nt4.45□□□□□ -1.7
UBP11P36026 APC1YNL172W 5247 nt4.44□□□□□ -1.7
UBP11P36026 BCP1YDR361C 852 nt4.44□□□□□ -1.7
UBP11P36026 CNN1YFR046C 1086 nt4.44□□□□□ -1.7
UBP11P36026 LSB1YGR136W 726 nt4.44□□□□□ -1.7
UBP11P36026 MRPS35YGR165W 1038 nt4.44□□□□□ -1.7
UBP11P36026 YHL034W-AYHL034W-A 462 nt4.44□□□□□ -1.7
UBP11P36026 YHR032C-AYHR032C-A 120 nt4.44□□□□□ -1.7
UBP11P36026 IMP3YHR148W 552 nt4.44□□□□□ -1.7
UBP11P36026 GCD7YLR291C 1146 nt4.44□□□□□ -1.7
Retrieved 100 of 7,029 protein–RNA pairs in 16.4 ms