Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.79■□□□□ 0.92
KRT20P35900 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.79■□□□□ 0.92
KRT20P35900 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
KRT20P35900 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
KRT20P35900 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
KRT20P35900 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT20P35900 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.78■□□□□ 0.92
KRT20P35900 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.78■□□□□ 0.92
KRT20P35900 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT20P35900 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.78■□□□□ 0.92
KRT20P35900 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
KRT20P35900 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.78■□□□□ 0.92
KRT20P35900 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.78■□□□□ 0.92
KRT20P35900 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KRT20P35900 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT20P35900 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT20P35900 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.77■□□□□ 0.92
KRT20P35900 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.77■□□□□ 0.92
KRT20P35900 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT20P35900 AC007375.3-201ENST00000600936 2314 ntBASIC20.77■□□□□ 0.92
KRT20P35900 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
KRT20P35900 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT20P35900 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
KRT20P35900 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT20P35900 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT20P35900 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.77■□□□□ 0.92
KRT20P35900 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
KRT20P35900 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.77■□□□□ 0.92
KRT20P35900 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT20P35900 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.77■□□□□ 0.91
KRT20P35900 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
KRT20P35900 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
KRT20P35900 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
KRT20P35900 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
KRT20P35900 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT20P35900 AC009102.2-201ENST00000606772 1639 ntBASIC20.76■□□□□ 0.91
KRT20P35900 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT20P35900 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.76■□□□□ 0.91
KRT20P35900 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KRT20P35900 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.76■□□□□ 0.91
KRT20P35900 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT20P35900 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KRT20P35900 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT20P35900 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
KRT20P35900 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT20P35900 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT20P35900 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.75■□□□□ 0.91
KRT20P35900 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.75■□□□□ 0.91
KRT20P35900 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT20P35900 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KRT20P35900 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT20P35900 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT20P35900 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
KRT20P35900 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT20P35900 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.75■□□□□ 0.91
KRT20P35900 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KRT20P35900 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KRT20P35900 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT20P35900 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT20P35900 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.75■□□□□ 0.91
KRT20P35900 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT20P35900 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KRT20P35900 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT20P35900 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.75■□□□□ 0.91
KRT20P35900 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT20P35900 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.75■□□□□ 0.91
KRT20P35900 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT20P35900 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT20P35900 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT20P35900 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
KRT20P35900 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KRT20P35900 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT20P35900 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
KRT20P35900 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
KRT20P35900 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.74■□□□□ 0.91
KRT20P35900 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.74■□□□□ 0.91
KRT20P35900 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.74■□□□□ 0.91
KRT20P35900 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
KRT20P35900 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.74■□□□□ 0.91
KRT20P35900 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KRT20P35900 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KRT20P35900 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.73■□□□□ 0.91
KRT20P35900 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.73■□□□□ 0.91
KRT20P35900 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KRT20P35900 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT20P35900 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.73■□□□□ 0.91
KRT20P35900 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT20P35900 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.73■□□□□ 0.91
KRT20P35900 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KRT20P35900 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.73■□□□□ 0.91
KRT20P35900 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.73■□□□□ 0.91
KRT20P35900 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KRT20P35900 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT20P35900 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.73■□□□□ 0.91
KRT20P35900 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KRT20P35900 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.73■□□□□ 0.91
KRT20P35900 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT20P35900 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT20P35900 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT20P35900 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms